{"id":"W2155886619","doi":"10.1093/bioinformatics/btv065","title":"Where are we at regarding species translation? A review of the sbv IMPROVER challenge","year":2015,"lang":"en","type":"review","venue":"Bioinformatics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Translation (biology); Computer science; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003139923,0.0003338665,0.0009643672,0.00002971401,0.00008426164,0.00001180564,0.0004227556,0.0002773566,0.00001385775],"category_scores_gemma":[0.00004877506,0.0002049268,0.000594261,0.0001135134,0.00009196968,0.000001379631,0.0003559602,0.0001310574,0.0000130733],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004440011,"about_ca_system_score_gemma":0.0001889407,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":9.164909e-7,"about_ca_topic_score_gemma":0.00002141753,"domain_scores_codex":[0.9985549,0.00006237857,0.0007773663,0.0001761792,0.0002278691,0.0002012456],"domain_scores_gemma":[0.9981886,0.00002087283,0.0008459971,0.0007322259,0.0001571136,0.00005518106],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000006335957,0.00003164704,0.000009438336,0.3493649,0.0005333721,5.120152e-7,0.0003487153,0.000001344785,0.00002491872,0.00005661852,0.06032064,0.5893016],"study_design_scores_gemma":[0.0001233716,0.00004929808,0.000001843244,0.03053226,0.0003932265,0.00001284319,0.00008496985,0.000004274712,0.00001783226,0.000006429429,0.9685415,0.0002321725],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00000406978,0.9913205,0.00001442919,0.0002073425,0.0002772334,0.000813564,0.0003073749,0.000002808013,0.007052659],"genre_scores_gemma":[0.000004137523,0.9978557,0.0005357654,0.00007490121,0.0001852005,0.00003196344,0.00007129795,0.00002957199,0.001211496],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9082208,"threshold_uncertainty_score":0.8356674,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07257934998167527,"score_gpt":0.2985734266777903,"score_spread":0.225994076696115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}