{"id":"W2155928126","doi":"10.1099/mic.0.038018-0","title":"Salmonella enterica subspecies enterica serovar Enteritidis Salmonella pathogenicity island 2 type III secretion system: role in intestinal colonization of chickens and systemic spread","year":2010,"lang":"en","type":"article","venue":"Microbiology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Saskatchewan Health Research Foundation","keywords":"Salmonella enteritidis; Microbiology; Salmonella enterica; Biology; Serotype; Salmonella; Pathogenicity island; Pathogen; Colonization; Subspecies; Enterobacteriaceae; Type three secretion system; Mutant; Virology; Bacteria; Escherichia coli; Genetics; Gene; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001586816,0.0003699703,0.0002278349,0.000172826,0.0001007723,0.0001866873,0.0001144397,0.0002708079,0.0004352138],"category_scores_gemma":[0.00007932905,0.0001160027,0.000197562,0.00006625806,0.0001878227,0.0001416279,0.0001471397,0.0003540367,0.00009810127],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000178723,"about_ca_system_score_gemma":0.0001912749,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001195139,"about_ca_topic_score_gemma":0.001728933,"domain_scores_codex":[0.9999013,0.00001633945,0.000009492689,0.00002846002,0.00001820752,0.00002615133],"domain_scores_gemma":[0.9998869,0.00001062869,0.0000336254,0.00001003995,0.00001472247,0.00004407335],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002685408,0.00005927136,0.0025937,0.00003626767,0.00000456917,0.0000513649,0.00001826933,0.00002926879,0.9960946,0.00001382172,0.00001411161,0.0008160694],"study_design_scores_gemma":[0.00005909847,0.006597404,0.2967098,0.00003444173,0.00008500145,0.001448312,0.0003300036,0.001140531,0.6917092,0.00005299563,0.001815863,0.00001729698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986669,0.0006799302,0.00030257,0.00002430542,0.000004667184,0.00001111666,0.00008396811,0.000005556273,0.0002211054],"genre_scores_gemma":[0.9977313,0.0005262193,0.0006801035,0.00002240736,0.000004027699,0.00001383071,0.0002051433,0.000003164922,0.0008137294],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001195139,"threshold_uncertainty_score":0.002376378,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007808012426432308,"score_gpt":0.1970570396753903,"score_spread":0.189249027248958,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}