{"id":"W2156010838","doi":"10.15252/msb.20145114","title":"Allelic expression mapping across cellular lineages to establish impact of non‐coding SNPs","year":2014,"lang":"en","type":"article","venue":"Molecular Systems Biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill Genome Centre; McGill University and Génome Québec Innovation Centre","funders":"Science for Life Laboratory; Knut och Alice Wallenbergs Stiftelse; British Heart Foundation; Vetenskapsrådet; Canadian Institutes of Health Research; National Institute for Health and Care Research; Genome Canada","keywords":"Biology; Single-nucleotide polymorphism; International HapMap Project; Genetics; Genome-wide association study; SNP; Transcription factor; Allele; Computational biology; Genetic association; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003878252,0.0001703299,0.0001910005,0.000708312,0.0001780654,0.0003090921,0.0001928226,0.0001654485,0.001334698],"category_scores_gemma":[0.0005600642,0.0001138936,0.0002489136,0.0004868727,0.0002140355,0.00006959793,0.0003362125,0.0003384858,0.0002756857],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000126022,"about_ca_system_score_gemma":0.0001291665,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009214674,"about_ca_topic_score_gemma":0.001822407,"domain_scores_codex":[0.9997041,0.0000680998,0.00002805305,0.00009661301,0.00006472202,0.00003844485],"domain_scores_gemma":[0.9995179,0.0002418357,0.00006743387,0.00009541294,0.00004257241,0.00003487008],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009815742,0.00001222713,0.01155086,0.00002080371,0.00002741905,0.00007641825,0.0000815493,0.0001956292,0.9845003,0.0002141583,0.00001468657,0.003207796],"study_design_scores_gemma":[0.00003754038,0.0004660786,0.4350609,0.00001640885,0.0001649864,0.0009981596,0.0002397103,0.005135127,0.5528546,0.001002044,0.004006776,0.0000177195],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9846706,0.0003080118,0.01331698,0.00002215089,0.000006439543,0.00003028468,0.00070093,0.00004244323,0.0009021435],"genre_scores_gemma":[0.991748,0.0002158686,0.006741072,0.0000374299,0.000003420168,0.00004081039,0.0006800149,0.00002441831,0.0005089883],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001334698,"threshold_uncertainty_score":0.004464984,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007261863880256988,"score_gpt":0.2651037690911596,"score_spread":0.2578419052109026,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}