{"id":"W2156424776","doi":"10.1128/jcm.01145-07","title":"Confirmatory Real-Time PCR Assay for Human Papillomavirus (HPV) Type 52 Infection in Anogenital Specimens Screened for HPV Infection with the Linear Array HPV Genotyping Test","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; University of Toronto; University of British Columbia; Institut National de Santé Publique du Québec; McGill University; Centre Hospitalier de l’Université de Montréal; Université de Montréal; Hôpital Notre-Dame","funders":"National Cancer Institute; Ontario HIV Treatment Network; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Genotyping; Typing; Human papillomavirus; Papillomaviridae; Virology; HPV infection; Polymerase chain reaction; Biology; Real-time polymerase chain reaction; Molecular biology; Genotype; Medicine; Microbiology; Gene; Cervical cancer; Genetics; Internal medicine; Cancer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00663351,0.0001807458,0.0007775883,0.0002204017,0.0001566121,0.00001728706,0.0001221834,0.0003774439,0.0007054306],"category_scores_gemma":[0.001817917,0.0001136712,0.0003432508,0.0002471379,0.0003083185,0.00007486513,0.00003032509,0.0008424979,0.00002189404],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001588707,"about_ca_system_score_gemma":0.0003266949,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001313419,"about_ca_topic_score_gemma":0.001091455,"domain_scores_codex":[0.9975945,0.0002491478,0.001298537,0.0002983212,0.0001111327,0.0004483814],"domain_scores_gemma":[0.995003,0.00303014,0.0005763153,0.0002411286,0.0009573252,0.0001920556],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.01669752,0.001063964,0.216957,0.0001803537,0.0004748013,0.00003689439,0.00009408672,0.00002208629,0.7246913,0.000125581,0.003804642,0.03585184],"study_design_scores_gemma":[0.01043138,0.01245605,0.8763965,0.00005602843,0.0002570322,0.00042545,0.00003432684,0.00003799187,0.01863829,0.0001629413,0.08088237,0.0002216011],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9889436,0.0002295625,0.00505641,0.00126823,0.0004722017,0.001063995,0.00002663525,0.00002409632,0.002915318],"genre_scores_gemma":[0.9940641,0.0003766817,0.001440368,0.0008942912,0.002768821,0.00001145263,0.00005435721,0.00004133266,0.0003485815],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.706053,"threshold_uncertainty_score":0.772397,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07804322284189118,"score_gpt":0.4216767028387215,"score_spread":0.3436334799968303,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}