{"id":"W2156705208","doi":"10.1099/ijs.0.034926-0","title":"Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi","year":2012,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":556,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Strategic Environmental Research and Development Program; National Science Foundation","keywords":"Biology; Dehalococcoides; Electron acceptor; Reductive dechlorination; Bioremediation; 16S ribosomal RNA; Microbiology; Bacteria; Nuclear chemistry; Biochemistry; Biodegradation; Chemistry; Organic chemistry; Ecology; Vinyl chloride","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001512891,0.001485723,0.0004286346,0.000642073,0.0004253144,0.0007395507,0.0002723672,0.0004062728,0.001404432],"category_scores_gemma":[0.0004400621,0.0002150265,0.000245697,0.000858256,0.0002202497,0.0006218268,0.0006649373,0.0004656086,0.001168488],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000348846,"about_ca_system_score_gemma":0.0004529451,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008279194,"about_ca_topic_score_gemma":0.01106047,"domain_scores_codex":[0.9997464,0.000008840277,0.0000318838,0.0001074644,0.00005974063,0.00004564169],"domain_scores_gemma":[0.9996383,0.00004316184,0.000123319,0.00003715111,0.00007677982,0.00008124877],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003459104,0.0001431474,0.05629901,0.0007460521,0.00006115506,0.001272506,0.0003698956,0.0004843047,0.856958,0.0003378726,0.001083751,0.08189844],"study_design_scores_gemma":[0.00006384018,0.0005993893,0.7561281,0.0001896636,0.0002145637,0.01116325,0.000940085,0.001175086,0.1611021,0.0004435458,0.06793201,0.00004843429],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9554635,0.01387941,0.005735635,0.0003087181,0.0001626473,0.0003703779,0.0118838,0.0002238767,0.01197199],"genre_scores_gemma":[0.9422939,0.007277362,0.01831328,0.0004137079,0.0000718432,0.0002533003,0.01908889,0.00003990707,0.01224774],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008279194,"threshold_uncertainty_score":0.01646203,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01772105797457793,"score_gpt":0.2405026147323105,"score_spread":0.2227815567577326,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}