{"id":"W2156908798","doi":"10.1128/iai.00194-15","title":"The CpxRA Two-Component System Is Essential for Citrobacter rodentium Virulence","year":2015,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; McGill University","funders":"University of British Columbia","keywords":"Citrobacter rodentium; Biology; Virulence; Microbiology; Type three secretion system; Pathogen; Enteropathogenic Escherichia coli; Complementation; Escherichia coli; Citrobacter; Enterobacteriaceae; Gene; Phenotype; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004230102,0.00007976683,0.00007241243,0.00001535936,0.0003856164,0.00007127205,0.00008137797,0.00004349934,0.000001301368],"category_scores_gemma":[0.000116144,0.0000581244,0.00004889937,0.00004469172,0.00009912515,0.00000585819,0.0001651002,0.00008618389,0.000004728848],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002308662,"about_ca_system_score_gemma":0.00003883454,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004338634,"about_ca_topic_score_gemma":0.0001268366,"domain_scores_codex":[0.9994114,0.0001145241,0.0001039186,0.0001258804,0.00008805599,0.0001562127],"domain_scores_gemma":[0.9994725,0.0000231098,0.00004308749,0.0002080779,0.0001959419,0.00005730063],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0006031384,0.0001611209,0.02133381,0.0001347769,0.0003352553,7.866118e-7,0.0004113071,0.00002349156,0.959796,0.0007040108,0.01042487,0.0060715],"study_design_scores_gemma":[0.003558422,0.0009394583,0.06519818,0.00005272966,0.00006969793,0.00003563415,0.001128517,0.002377152,0.384574,0.0002151895,0.5413827,0.0004683629],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949142,0.0006789968,0.002581849,0.0001692428,0.0003829418,0.000221093,0.000007630849,0.00001564682,0.001028347],"genre_scores_gemma":[0.9986962,0.0004641948,0.00005101446,0.00006786345,0.0001715393,0.00007058132,0.00001254184,0.000007149859,0.0004589319],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.575222,"threshold_uncertainty_score":0.2965888,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02084189474052524,"score_gpt":0.3044584777124994,"score_spread":0.2836165829719742,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}