{"id":"W2157003221","doi":"10.1111/j.1550-7408.2006.00116.x","title":"Species of <i>Tetrahymena</i> Identical by Small Subunit rRNA Gene Sequences are Discriminated by Mitochondrial Cytochrome <i>c</i> Oxidase I Gene Sequences","year":2006,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Tetrahymena; Biology; Tetrahymena pyriformis; Ribosomal RNA; Gene; Genetics; Cytochrome c oxidase; Nucleic acid sequence; Molecular biology; Mitochondrion","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002895904,0.0003787561,0.0007349158,0.0001074409,0.0001186343,0.00003626703,0.0006050555,0.0003035141,0.00004632166],"category_scores_gemma":[0.00009314147,0.0003102387,0.0003182023,0.0001484465,0.0007138382,0.000005420937,0.0001744288,0.0002275255,0.000004970298],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003799134,"about_ca_system_score_gemma":0.0001533495,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001427171,"about_ca_topic_score_gemma":0.0001021824,"domain_scores_codex":[0.9975546,0.0002126414,0.001167275,0.0004175054,0.0001353809,0.0005125826],"domain_scores_gemma":[0.9981237,0.00007416335,0.001003332,0.0002973616,0.0003741859,0.0001272284],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001916948,0.0002235942,0.006172429,0.00003270409,0.0002584477,0.00004495128,0.00003818985,0.00006764843,0.9694322,0.00002360962,0.02348104,0.00003346091],"study_design_scores_gemma":[0.001285176,0.00101828,0.005386783,0.00003760963,0.000175222,0.0007724889,0.0001651193,0.000002183015,0.9827456,0.0002541799,0.00780384,0.0003535191],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9823767,0.01488552,0.0007008239,0.0003634024,0.0006659614,0.0001875638,0.0006601303,0.00000345697,0.000156457],"genre_scores_gemma":[0.9942853,0.001533568,0.002240414,0.0002323067,0.0006215879,0.000004707951,0.0002431784,0.00003128406,0.0008076507],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0156772,"threshold_uncertainty_score":0.999935,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00964227047096511,"score_gpt":0.2072211072566285,"score_spread":0.1975788367856634,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}