{"id":"W2157047481","doi":"10.1534/genetics.114.162883","title":"Birth, Death, and Diversification of Mobile Promoters in Prokaryotes","year":2014,"lang":"en","type":"article","venue":"Genetics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Biology; Mobile genetic elements; Genome; Promoter; Genetics; Gene duplication; Horizontal gene transfer; Gene; Computational biology; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000454489,0.000170578,0.0003123569,0.00054337,0.0003231119,0.0004331323,0.0002955172,0.00034133,0.0002384323],"category_scores_gemma":[0.001443818,0.0001896943,0.0002828934,0.0003102633,0.0005473614,0.0005993985,0.0004568098,0.0004183001,0.0001293852],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004197275,"about_ca_system_score_gemma":0.0002575404,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00060561,"about_ca_topic_score_gemma":0.0005525377,"domain_scores_codex":[0.9998026,0.00003311418,0.00001348687,0.00006097686,0.00005547655,0.00003435189],"domain_scores_gemma":[0.9993094,0.0003547365,0.0001343145,0.00006276592,0.00005573866,0.00008305227],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005458024,0.00006196089,0.1753746,0.0002593119,0.00005233797,0.0009011964,0.0006597248,0.01929799,0.7620507,0.008803535,0.000122852,0.03187005],"study_design_scores_gemma":[0.00006381774,0.0009418612,0.1940563,0.0000777906,0.0001165623,0.004666059,0.00116977,0.2939427,0.4650817,0.03592617,0.003845362,0.0001118445],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9904397,0.0005233736,0.008569761,0.00004033154,0.000002753152,0.000005754552,0.00005273102,0.0000419986,0.0003236602],"genre_scores_gemma":[0.9965609,0.0001820652,0.003011134,0.00001063071,0.000002198693,0.000006593327,0.00009939751,0.000006404511,0.000120733],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00060561,"threshold_uncertainty_score":0.003045321,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009223566398650117,"score_gpt":0.2180919389763301,"score_spread":0.20886837257768,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}