{"id":"W2157094426","doi":"10.1186/1471-2164-10-529","title":"GExplore: a web server for integrated queries of protein domains, gene expression and mutant phenotypes","year":2009,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Michael Smith Health Research BC; Universities Space Research Association","keywords":"Biology; Phenotype; Gene; Interface (matter); Function (biology); Computational biology; Genome; Mutant; Database; Modular design; Genetics; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001481661,0.0001457718,0.000170337,0.00002545396,0.00006042033,0.00002131049,0.0001207846,0.0001510936,0.000003028173],"category_scores_gemma":[0.00002392579,0.0001242082,0.00006529277,0.00003636329,0.00005692108,0.000005085286,0.0000613754,0.00004997676,8.502642e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001247078,"about_ca_system_score_gemma":0.0001160814,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003823077,"about_ca_topic_score_gemma":0.00004018417,"domain_scores_codex":[0.9992891,0.00001772366,0.000271173,0.0001874786,0.00005061545,0.0001839002],"domain_scores_gemma":[0.999494,0.000007091992,0.0001334288,0.000245981,0.00006138052,0.00005814829],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003048962,0.00002955226,0.00008068372,0.00004680076,0.00001697081,2.076992e-7,0.000141681,0.0001025398,0.9950255,0.0004480938,0.0002317468,0.00357135],"study_design_scores_gemma":[0.001014313,0.0004276317,0.0001477634,0.00003112465,0.00001790207,0.000006251532,0.0002160462,0.001429797,0.9783007,0.002022008,0.01617128,0.0002152096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9778766,0.00116561,0.0201993,0.00004638634,0.00004896347,0.0004931688,0.00007622809,0.00000867322,0.00008506904],"genre_scores_gemma":[0.9463212,0.0002145249,0.05289238,0.0001198167,0.0001200054,0.00002751797,0.0001671106,0.00001613894,0.0001213032],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03269307,"threshold_uncertainty_score":0.5065065,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009854633115802543,"score_gpt":0.2153626869585109,"score_spread":0.2055080538427083,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}