{"id":"W2157211770","doi":"","title":"Development and Characterization of a High Density\\nSNP Genotyping Assay for Cattle","year":2009,"lang":"","type":"article","venue":"Insecta mundi","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1050,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Genotyping; Biology; Single-nucleotide polymorphism; Genetics; SNP genotyping; Quantitative trait locus; SNP; Molecular Inversion Probe; Genome-wide association study; SNP array; Minor allele frequency; Computational biology; Genotype; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002979667,0.0007333282,0.0008121171,0.001331096,0.0006393507,0.001059863,0.001176499,0.001303173,0.002038973],"category_scores_gemma":[0.003224505,0.0006473307,0.0006703694,0.0007814874,0.0004615684,0.0003237771,0.0006194902,0.001088217,0.001979911],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006571759,"about_ca_system_score_gemma":0.0009859664,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003215422,"about_ca_topic_score_gemma":0.008028075,"domain_scores_codex":[0.9963702,0.0008444369,0.0002531726,0.0009080652,0.001340903,0.0002832164],"domain_scores_gemma":[0.9985694,0.0005066,0.0001678249,0.0001797543,0.0003858522,0.0001906309],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001799625,0.0001000014,0.006006881,0.0001647259,0.00005854708,0.00008961253,0.0001109164,0.00135347,0.9579108,0.0007469239,0.0006233559,0.03265468],"study_design_scores_gemma":[0.0001496156,0.00158882,0.06591707,0.0001206859,0.0002643368,0.001309108,0.0001196828,0.04900092,0.8394614,0.001130042,0.04081671,0.000121618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.2237799,0.0008976852,0.7570472,0.0004305547,0.0001608569,0.001868339,0.005896735,0.003227603,0.006691081],"genre_scores_gemma":[0.1754353,0.0005774946,0.7991714,0.0004219339,0.00006180107,0.001670962,0.0155039,0.0003451462,0.006811888],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.003215422,"threshold_uncertainty_score":0.01575816,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01308263458135979,"score_gpt":0.2285679100946987,"score_spread":0.2154852755133389,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}