{"id":"W2157298599","doi":"10.1534/genetics.111.130468","title":"Cost of Adaptation and Fitness Effects of Beneficial Mutations in<i>Pseudomonas fluorescens</i>","year":2011,"lang":"en","type":"article","venue":"Genetics","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natur og Univers, Det Frie Forskningsråd","keywords":"Biology; Pseudomonas fluorescens; Adaptation (eye); Genetics; Genetic Fitness; Experimental evolution; Mutation; Evolutionary biology; Gene; Bacteria; Neuroscience","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003886303,0.0002235487,0.0002593627,0.0003172202,0.0001787663,0.0003817455,0.0002565868,0.0002811232,0.0004383891],"category_scores_gemma":[0.001759891,0.0001325602,0.0002195289,0.0002620908,0.0002987586,0.0003196988,0.0003675042,0.0004794761,0.00007838428],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006299876,"about_ca_system_score_gemma":0.0002049217,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001442456,"about_ca_topic_score_gemma":0.001660374,"domain_scores_codex":[0.9996834,0.00006971642,0.00002553505,0.00008309199,0.00008830708,0.00005003985],"domain_scores_gemma":[0.9989377,0.0005861364,0.0002365343,0.00009621302,0.00005286111,0.00009056505],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005462215,0.0002646804,0.08446764,0.0000859998,0.0001055987,0.0002305721,0.00007337386,0.01183511,0.8848756,0.0006803693,0.0001056485,0.01672931],"study_design_scores_gemma":[0.00006409577,0.001330849,0.6298994,0.00001431244,0.0001576836,0.001754555,0.0003040354,0.08440262,0.2790838,0.002232338,0.0006931017,0.00006311549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994963,0.00002978879,0.0003290691,0.00001483691,4.129111e-7,0.000001226788,0.00003136189,0.000007196708,0.00008979253],"genre_scores_gemma":[0.999453,0.00002832528,0.0004015683,0.000007430261,6.953915e-7,0.000003672988,0.00006137295,0.00000436013,0.00003948935],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001442456,"threshold_uncertainty_score":0.004570901,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0187187773801244,"score_gpt":0.2421156170064207,"score_spread":0.2233968396262963,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}