{"id":"W2157368671","doi":"10.1093/jhered/esr043","title":"Haplotype-Based Genomic Sequencing of a Chromosomal Polymorphism in the White-Throated Sparrow (Zonotrichia albicollis)","year":2011,"lang":"en","type":"article","venue":"Journal of Heredity","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Mental Health; BC Cancer Agency; National Institutes of Health; Canada's Michael Smith Genome Sciences Centre","keywords":"Biology; Haplotype; Genetics; Chromosomal inversion; Breakpoint; Evolutionary biology; Loss of heterozygosity; Karyotype; Chromosome; Allele; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009825013,0.0001305276,0.0001511863,0.0005055021,0.000153167,0.0002032009,0.0001274457,0.0002186718,0.0004489894],"category_scores_gemma":[0.0003909602,0.0001116292,0.0002258587,0.0004082291,0.0001568983,0.0001016924,0.0002152519,0.0002546959,0.0002480311],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001733364,"about_ca_system_score_gemma":0.0001851627,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001447951,"about_ca_topic_score_gemma":0.005593942,"domain_scores_codex":[0.9999188,0.0000115161,0.000005101114,0.00003316695,0.00002097369,0.00001038783],"domain_scores_gemma":[0.9997495,0.00005547017,0.00009694477,0.00003233957,0.00003303102,0.00003280014],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001447107,0.00002747057,0.00889155,0.00007527429,0.0000319923,0.0001355201,0.0002506058,0.0004380273,0.9810479,0.0001469254,0.00004589491,0.008764162],"study_design_scores_gemma":[0.00009790033,0.0008671317,0.8110182,0.00005774787,0.0002971329,0.001372938,0.0004469329,0.004261155,0.1746174,0.0004763264,0.006451832,0.00003531791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927692,0.0002069545,0.004370715,0.00002829051,0.000003993304,0.00003557248,0.001999146,0.00003185715,0.0005541735],"genre_scores_gemma":[0.9849266,0.0001762811,0.008970107,0.00005434748,0.000008057227,0.00004883916,0.005176433,0.00002499666,0.0006142718],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001447951,"threshold_uncertainty_score":0.002879083,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03337234489850484,"score_gpt":0.2226929555165566,"score_spread":0.1893206106180517,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}