{"id":"W2157402147","doi":"10.1128/jb.00581-06","title":"Genome Sequence and Global Gene Expression of Q54, a New Phage Species Linking the 936 and c2 Phage Species of <i>Lactococcus lactis</i>","year":2006,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":64,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Lactococcus lactis; Genome; Gene; Bacteriophage; Genetics; Bacteria; Microbiology; Whole genome sequencing; Sequence (biology); Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002184546,0.0001438941,0.0003477045,0.00003520298,0.00009783478,0.00003376759,0.0002117029,0.00008612349,0.0006902647],"category_scores_gemma":[0.00002368596,0.00009722314,0.00008860919,0.00009883824,0.0004618763,0.0003161977,0.0001987333,0.0002157695,0.000004048253],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007924631,"about_ca_system_score_gemma":0.00002389802,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003373447,"about_ca_topic_score_gemma":0.0001289244,"domain_scores_codex":[0.9989154,0.0001063174,0.0005241398,0.0001552017,0.0001087561,0.0001902253],"domain_scores_gemma":[0.9989824,0.00009739333,0.0006783893,0.0001447634,0.00002622896,0.00007087392],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00009098049,0.00004140625,0.008429863,0.00001197766,0.00001561905,0.00001967108,0.0002448696,0.00003204391,0.9899325,0.00002142433,0.0002487554,0.0009108917],"study_design_scores_gemma":[0.0004958385,0.0002724766,0.8011179,0.00005937204,0.0000434089,0.0007129597,0.0001256208,0.000004100275,0.1741417,0.0002556147,0.02266233,0.0001086518],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972873,0.0004141271,0.0003604007,0.0002937916,0.0003063392,0.0001079811,0.00005336953,0.000003914182,0.001172757],"genre_scores_gemma":[0.9971235,0.0004520107,0.001507292,0.00009505515,0.0002367258,8.088323e-7,0.000004117531,0.00000736288,0.0005730811],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8157908,"threshold_uncertainty_score":0.7557914,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01565657234362121,"score_gpt":0.237425791628961,"score_spread":0.2217692192853398,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}