{"id":"W2157812383","doi":"10.1128/jcm.01344-09","title":"Switching Gears for an Influenza Pandemic: Validation of a Duplex Reverse Transcriptase PCR Assay for Simultaneous Detection and Confirmatory Identification of Pandemic (H1N1) 2009 Influenza Virus","year":2009,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Public Health Agency of Canada; Queen Elizabeth II Health Sciences Centre","funders":"Centers for Disease Control and Prevention; University of Ottawa","keywords":"Virology; Virus; Influenza A virus; Multiplex; Biology; Orthomyxoviridae; Real-time polymerase chain reaction; Pandemic; Viral culture; Reverse transcription polymerase chain reaction; Hemagglutinin (influenza); Immunoassay; Microbiology; Medicine; Infectious disease (medical specialty); Immunology; Antibody; Gene; Coronavirus disease 2019 (COVID-19); Pathology; Disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002984474,0.000946547,0.0007463259,0.0004827478,0.000266958,0.0006324686,0.0006489494,0.0009078109,0.0006764341],"category_scores_gemma":[0.00426944,0.0005474676,0.0004493964,0.0002335601,0.0006200014,0.0005771322,0.0003451555,0.0006116355,0.0005777145],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003977315,"about_ca_system_score_gemma":0.0005206974,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008672353,"about_ca_topic_score_gemma":0.001351011,"domain_scores_codex":[0.995997,0.0009353959,0.0003462999,0.001163969,0.001395173,0.0001620883],"domain_scores_gemma":[0.9980335,0.0008709689,0.0002397324,0.0002066544,0.0005719427,0.00007722749],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002827571,0.0001153618,0.007618253,0.00008607229,0.00001829913,0.00004336035,0.0001541649,0.0003189954,0.9826739,0.00005224149,0.00007721035,0.00855941],"study_design_scores_gemma":[0.0000471405,0.00190639,0.02188866,0.00003061821,0.00010847,0.0005035005,0.0001468317,0.01017168,0.9632396,0.00008202442,0.001829272,0.00004575442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.9481802,0.0007768727,0.04855061,0.00007542368,0.0001366492,0.0004290967,0.0004882626,0.0003335999,0.001029289],"genre_scores_gemma":[0.8431361,0.0006873496,0.1505513,0.0003341025,0.00005884051,0.0008182314,0.001857032,0.00007134015,0.002485783],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.002984474,"threshold_uncertainty_score":0.01578361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.17939536386767,"score_gpt":0.4692637256291654,"score_spread":0.2898683617614953,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}