{"id":"W2157815206","doi":"10.1128/jb.00392-07","title":"Clocking Out: Modeling Phage-Induced Lysis of <i>Escherichia coli</i>","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Killam Trusts","keywords":"Lysis; Biology; Biophysics; Nucleation; Escherichia coli; Membrane; Cytolysis; Spheroplast; Depolarization; Cell biology; Chemistry; Biochemistry; In vitro","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000218195,0.0005268707,0.0005131498,0.0002809697,0.0005079684,0.0006387761,0.0009250899,0.001443112,0.002399836],"category_scores_gemma":[0.0008032029,0.0003521625,0.0005851051,0.0002643439,0.0006426114,0.0004442281,0.0004816552,0.000694981,0.0001650887],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001321816,"about_ca_system_score_gemma":0.001103535,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0307578,"about_ca_topic_score_gemma":0.01498482,"domain_scores_codex":[0.9999247,0.0000185981,0.000002905286,0.00001297527,0.00001214928,0.00002879966],"domain_scores_gemma":[0.9995965,0.0002068616,0.0000697683,0.00001525592,0.00004730255,0.00006437024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.00003557762,0.00003391672,0.0005925801,0.000016563,0.000007855148,0.00005738436,0.00001588967,0.9964166,0.001137502,0.001192876,0.00009290085,0.0004003718],"study_design_scores_gemma":[0.00001113289,0.00001417087,0.0001480529,0.000002063274,0.000003207731,0.000003691579,0.000008802257,0.9990778,0.0002987252,0.0003009723,0.0001276931,0.000003604472],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9521637,0.000285537,0.02917551,0.0005603331,0.00008122505,0.00007172996,0.0004940428,0.0002510397,0.01691687],"genre_scores_gemma":[0.9904697,0.0001444388,0.00576135,0.00007448956,0.00001172715,0.00008480778,0.0001835485,0.00005216243,0.003217886],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0307578,"threshold_uncertainty_score":0.06115752,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02202822630655187,"score_gpt":0.2726051905037533,"score_spread":0.2505769641972014,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}