{"id":"W2158046634","doi":"10.1128/aem.00524-15","title":"Giardia spp. Are Commonly Found in Mixed Assemblages in Surface Water, as Revealed by Molecular and Whole-Genome Characterization","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"Provincial Health Services Authority; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Giardia; Giardia lamblia; Outbreak; Surface water; Waterborne diseases; Biology; Cryptosporidium; Veterinary medicine; Ecology; Microbiology; Feces; Virology; Environmental science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001486385,0.0003819131,0.000376901,0.001299238,0.0005731581,0.0009485581,0.0002033438,0.0003263776,0.0007540585],"category_scores_gemma":[0.0004964084,0.0002633603,0.0002122718,0.001732955,0.00038639,0.0003429425,0.0004927489,0.0002187362,0.0003259587],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002129824,"about_ca_system_score_gemma":0.0003250669,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02100382,"about_ca_topic_score_gemma":0.0227964,"domain_scores_codex":[0.9995751,0.00002886489,0.00003143053,0.0001618318,0.0001088168,0.0000939234],"domain_scores_gemma":[0.9997357,0.00002583301,0.00009280122,0.00002130229,0.00008899127,0.00003530947],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002589532,0.00005400778,0.568508,0.0002094265,0.0001264892,0.0007114819,0.001637461,0.00009788093,0.4040537,0.0001046702,0.0005608714,0.02367702],"study_design_scores_gemma":[0.000003155565,0.00007010912,0.9890622,0.00002051129,0.00004113072,0.0007226295,0.00099541,0.0002191005,0.005668159,0.00005821497,0.003130678,0.000008804785],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952696,0.001231211,0.001006367,0.00004668272,0.00000980448,0.00003710639,0.001211201,0.00003036575,0.001157679],"genre_scores_gemma":[0.9937814,0.0008511107,0.001933864,0.000101712,0.00001079129,0.00002810836,0.00230554,0.00001277006,0.0009747744],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02100382,"threshold_uncertainty_score":0.04176313,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005881909551167668,"score_gpt":0.192709937044603,"score_spread":0.1868280274934354,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}