{"id":"W2158109845","doi":"10.1371/journal.ppat.1004264","title":"A Novel Mouse Model of Campylobacter jejuni Gastroenteritis Reveals Key Pro-inflammatory and Tissue Protective Roles for Toll-like Receptor Signaling during Infection","year":2014,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":122,"is_retracted":false,"has_abstract":true,"ca_institutions":"Child and Family Research Institute; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; National Cancer Institute; Crohn's and Colitis Foundation of Canada; Canadian Association of Gastroenterology; Crohn's and Colitis Foundation","keywords":"Campylobacter jejuni; Microbiology; Biology; TLR2; TLR4; Flagellin; TLR5; Pathogen; Receptor; Immunology; Colonization; Toll-like receptor; Innate immune system; Inflammation; Bacteria; Immune system","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000347458,0.0002030303,0.000380474,0.00002611602,0.0001678692,0.00002434937,0.0001080257,0.0001525272,0.00002167034],"category_scores_gemma":[0.0001926007,0.0001035362,0.00009902152,0.00007511309,0.00006992667,0.0001189682,0.00007196607,0.00009288755,0.000002655166],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003333766,"about_ca_system_score_gemma":0.000006139206,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003810151,"about_ca_topic_score_gemma":0.000177996,"domain_scores_codex":[0.9985939,0.0001384623,0.0003805587,0.0004101232,0.0001178727,0.0003591244],"domain_scores_gemma":[0.999277,0.0001452566,0.0002382025,0.00008227945,0.0001437476,0.0001134931],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001173262,0.0001072784,0.02998487,0.00008859646,0.00002796868,2.547255e-7,0.0001759115,0.00007876532,0.9676495,0.00003768208,0.00001167456,0.001720226],"study_design_scores_gemma":[0.001076693,0.00161748,0.1151254,0.000291829,0.0001071409,0.00003167315,0.0002186774,0.00469296,0.8749219,0.0008875779,0.0004141413,0.0006145182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973335,0.00002272625,0.00120824,0.0001222289,0.00004817393,0.0008517083,0.0003204149,0.00007028574,0.0000227624],"genre_scores_gemma":[0.996883,0.00002824586,0.002357058,0.0000746956,0.0002283597,0.0002565398,0.00004672883,0.00000488865,0.0001204603],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09272753,"threshold_uncertainty_score":0.4222082,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02561764995326692,"score_gpt":0.2187498137048826,"score_spread":0.1931321637516157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}