{"id":"W2158981139","doi":"10.1128/jcm.43.12.5925-5935.2005","title":"Polyphasic Characterization Reveals that the Human Pathogen <i>Mycobacterium peregrinum</i> Type II Belongs to the Bovine Pathogen Species <i>Mycobacterium senegalense</i>","year":2005,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Biology; Microbiology; Mycobacterium fortuitum; Internal transcribed spacer; Pathogen; Mycobacterium; Ribosomal RNA; Bacteria; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001394538,0.0003870248,0.0002531288,0.000732242,0.0001807189,0.0005610468,0.0002470378,0.0003502828,0.0009179225],"category_scores_gemma":[0.000614404,0.0001317775,0.0001863275,0.0004685656,0.0001842214,0.0002932652,0.0002195314,0.0002265218,0.0004290123],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001884424,"about_ca_system_score_gemma":0.0001351589,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002330507,"about_ca_topic_score_gemma":0.002007975,"domain_scores_codex":[0.9998299,0.00002515297,0.00001641706,0.00005405252,0.00003597191,0.00003839908],"domain_scores_gemma":[0.9995994,0.00006414467,0.0001380533,0.00003730854,0.0000840971,0.00007689876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006143283,0.0001328332,0.1588882,0.0003285821,0.0000658167,0.001094081,0.0007755513,0.0001407193,0.8111699,0.0001459695,0.0007036165,0.0259403],"study_design_scores_gemma":[0.00003830453,0.001744182,0.8222799,0.0001460415,0.0003347289,0.01827746,0.001882266,0.001399099,0.1277661,0.0002316085,0.02586577,0.00003462602],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929605,0.00338123,0.001499827,0.0001157289,0.00002167023,0.00005151641,0.0005627263,0.00002414413,0.001382533],"genre_scores_gemma":[0.9896234,0.001347754,0.005588562,0.0002163276,0.0000588945,0.00003967312,0.001871233,0.00001487031,0.001239368],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002330507,"threshold_uncertainty_score":0.004633844,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05747040524984985,"score_gpt":0.3506637669353511,"score_spread":0.2931933616855013,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}