{"id":"W2159289096","doi":"10.1093/molbev/msv169","title":"<i>Cis-</i> Regulatory Changes Associated with a Recent Mating System Shift and Floral Adaptation in <i>Capsella</i>","year":2015,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Uppsala Multidisciplinary Center for Advanced Computational Science; Stockholms Universitet; Vetenskapsrådet; Royal Swedish Academy of Sciences; Science for Life Laboratory; University of Toronto; Deutsche Forschungsgemeinschaft; Knut och Alice Wallenbergs Stiftelse; Magnus Bergvalls Stiftelse; McGill University","keywords":"Biology; Selfing; Outcrossing; Mating system; Evolutionary biology; Genetics; Adaptation (eye); Mating; Botany; Population; Pollen","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000539183,0.0001596064,0.000186676,0.00007052523,0.00005476096,0.000008487654,0.00005720704,0.0002850133,3.579581e-7],"category_scores_gemma":[0.0001547011,0.0001403642,0.00001370557,0.0001111112,0.0001818272,0.000005536898,0.0000693054,0.00009643286,0.000001062139],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006951507,"about_ca_system_score_gemma":0.00006566984,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007417243,"about_ca_topic_score_gemma":0.0005508876,"domain_scores_codex":[0.9987487,0.000313556,0.0001536465,0.00047752,0.00006127589,0.0002453049],"domain_scores_gemma":[0.9995502,0.00001112177,0.0001099436,0.0001663324,0.00008687909,0.00007551895],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008593225,0.00007659825,0.09935216,0.00004759146,0.0001310913,0.00002916892,0.0003252628,0.0002848248,0.8912037,0.004907784,0.0001834077,0.002599069],"study_design_scores_gemma":[0.01690652,0.01268505,0.6472915,0.0007956136,0.0004024293,0.001521262,0.005663821,0.007653083,0.2828546,0.008584633,0.01195962,0.00368183],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9887378,0.003984507,0.006454865,0.0002639934,0.0001093033,0.0002245242,0.00002221516,0.0000247049,0.0001780644],"genre_scores_gemma":[0.9987307,0.00008144573,0.0005461198,0.0001057967,0.00006693219,0.00003147074,0.0004082978,0.00001265377,0.00001662752],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6083491,"threshold_uncertainty_score":0.5723884,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01213068040354053,"score_gpt":0.2246483422257612,"score_spread":0.2125176618222206,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}