{"id":"W2159332209","doi":"10.1002/prot.20391","title":"Selective targeting of indel‐inferred differences in spatial structures of highly homologous proteins","year":2005,"lang":"en","type":"article","venue":"Proteins Structure Function and Bioinformatics","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"Vancouver Coastal Health Research Institute; University of British Columbia","funders":"","keywords":"Biology; Indel; Virulence; Genetics; Peptide sequence; Human pathogen; Sequence alignment; Computational biology; Virulence factor; Gene; Sequence (biology)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001869813,0.0002204339,0.0005509799,0.0003762381,0.00008618078,0.00001849931,0.00008739677,0.0001818199,0.00006829179],"category_scores_gemma":[0.0004272149,0.0001530674,0.00006131615,0.0003646382,0.0002487111,0.0002122392,0.00009071056,0.0003932038,9.044558e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007143807,"about_ca_system_score_gemma":0.0001402371,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002518653,"about_ca_topic_score_gemma":0.0003326932,"domain_scores_codex":[0.9982821,0.0000517892,0.0007253506,0.0001671877,0.0004883403,0.00028525],"domain_scores_gemma":[0.9989908,0.000049187,0.0003831059,0.0001706952,0.0003220805,0.00008407372],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.003748205,0.0004501572,0.6005096,0.006191484,0.0006275112,0.000006803509,0.01330699,0.0001389882,0.1222468,0.002657157,0.0004527062,0.2496635],"study_design_scores_gemma":[0.003178857,0.002254616,0.8803031,0.0002313194,0.00007605063,0.00003387568,0.001562899,0.004308889,0.1052976,0.002335648,0.0001463248,0.0002708784],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927043,0.0002943542,0.004213413,0.0003532213,0.0000702233,0.00166293,0.00004728237,0.00003706217,0.0006172381],"genre_scores_gemma":[0.9752042,0.00005639412,0.02447505,0.00005364184,0.0001088885,0.00003326363,0.00002464257,0.00001122973,0.00003272787],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2797934,"threshold_uncertainty_score":0.6241907,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01511394449705348,"score_gpt":0.2516772723451812,"score_spread":0.2365633278481278,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}