{"id":"W2159466554","doi":"10.1128/jcm.00043-08","title":"Evaluation of Three Automated Nucleic Acid Amplification Systems for Detection of <i>Chlamydia trachomatis</i> and <i>Neisseria gonorrhoeae</i> in First-Void Urine Specimens","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saskatchewan Disease Control Laboratory","funders":"","keywords":"Neisseria gonorrhoeae; Chlamydia trachomatis; Nucleic acid; Gonorrhea; Virology; Chlamydiales; Urine; Chlamydiaceae; Microbiology; Biology; Chlamydia; Immunology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006738489,0.0001616686,0.0009142973,0.000398402,0.00009353128,0.000005208311,0.000198762,0.0004806819,0.00004419285],"category_scores_gemma":[0.003155183,0.0001379713,0.0002091482,0.0002912868,0.0005727704,0.0001570043,0.00003861532,0.0005240398,0.00001297551],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009744493,"about_ca_system_score_gemma":0.0002657894,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000817684,"about_ca_topic_score_gemma":0.0001525989,"domain_scores_codex":[0.9959521,0.001165233,0.002287425,0.0003049824,0.00004263826,0.0002475921],"domain_scores_gemma":[0.9951114,0.00123134,0.001702422,0.0002993843,0.001622168,0.0000332907],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009093506,0.0006361019,0.03533933,0.00007483697,0.0003096333,5.456545e-7,0.0001014508,0.0004220039,0.9571402,0.00002484155,0.0002672255,0.00477448],"study_design_scores_gemma":[0.00827666,0.002241425,0.7570918,0.000150436,0.0003128851,0.002210749,0.0001184096,0.0009817553,0.2248635,0.0002610859,0.003290241,0.0002010997],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9917507,0.005015161,0.0009671215,0.0001019556,0.001239882,0.0008179416,0.00004793904,0.00001925579,0.00004006969],"genre_scores_gemma":[0.9985148,0.001053096,0.0002285641,0.00000797367,0.000111359,0.0000272888,0.0000243273,0.00001684731,0.00001568615],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7322767,"threshold_uncertainty_score":0.5626307,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0959883036618343,"score_gpt":0.3755170596326124,"score_spread":0.2795287559707781,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}