{"id":"W2159585370","doi":"10.1128/iai.01199-06","title":"Contribution of Phagocytosis and Intracellular Sensing for Cytokine Production by <i>Staphylococcus aureus</i> -Activated Macrophages","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Biology; TLR2; NOD1; Phagocytosis; Muramyl dipeptide; TLR4; Peptidoglycan; Microbiology; Cytokine; Lipoteichoic acid; NOD2; Tumor necrosis factor alpha; Cell biology; Staphylococcus aureus; Receptor; Bacteria; Innate immune system; Immunology; Immune system; Signal transduction; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003455756,0.0004713825,0.0003909323,0.0001596936,0.0001435069,0.0004713853,0.0001417935,0.0004066588,0.0007554445],"category_scores_gemma":[0.0002386259,0.0001578275,0.0002143189,0.00006882007,0.0002465138,0.0002636289,0.0003286497,0.000378942,0.0003017299],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002283673,"about_ca_system_score_gemma":0.0002822721,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000202209,"about_ca_topic_score_gemma":0.0001659134,"domain_scores_codex":[0.9996705,0.0001027924,0.00003838263,0.00005249247,0.00006569523,0.00007018195],"domain_scores_gemma":[0.9998474,0.0000360308,0.00003088392,0.00001711418,0.00003097376,0.00003750414],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000301664,0.00001603003,0.0004542651,0.00006455565,0.000003950746,0.00006862129,0.000008543906,0.00003586418,0.9981837,0.00005684842,0.00001725928,0.0007887468],"study_design_scores_gemma":[0.00005250532,0.0005153666,0.008521159,0.000024801,0.00004254999,0.0006960486,0.0000745541,0.001472099,0.9864711,0.0001554911,0.001964482,0.000009896137],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927742,0.003542579,0.001839735,0.0001402674,0.00004038853,0.0000205617,0.0001198546,0.00002402802,0.001498305],"genre_scores_gemma":[0.9948266,0.001407563,0.001826325,0.0001159734,0.00003808408,0.00004639548,0.0002150703,0.00001501098,0.001508812],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007554445,"threshold_uncertainty_score":0.002527237,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005565924159064068,"score_gpt":0.2173837474340314,"score_spread":0.2118178232749673,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}