{"id":"W2159625083","doi":"10.1038/ismej.2008.46","title":"Function and evolution of the <i>psbA</i> gene family in marine <i>Synechococcus: Synechococcus</i> sp. WH7803 as a case study","year":2008,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Allison University","funders":"Natural Sciences and Engineering Research Council of Canada; Région Bretagne; Canada Research Chairs; Agence Nationale de la Recherche","keywords":"Biology; Gene; Synechococcus; Genome; Genetics; Photosystem II; Gene isoform; Cyanobacteria; Gene family; Phylogenetic tree; Botany; Photosynthesis; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005402131,0.0001535009,0.0001651189,0.00004571252,0.0002867533,0.00001861528,0.0002367235,0.00009244637,0.0000098962],"category_scores_gemma":[0.00006541167,0.00009168546,0.00008128718,0.0001499304,0.0000964872,0.00001040804,0.0002219299,0.0002716262,0.000001953536],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003442045,"about_ca_system_score_gemma":0.0001947252,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00038489,"about_ca_topic_score_gemma":0.0001743796,"domain_scores_codex":[0.9989192,0.0001438318,0.0003126815,0.0001983497,0.0002128206,0.0002130811],"domain_scores_gemma":[0.9992818,0.00001608729,0.000202285,0.000333786,0.00009787075,0.00006820743],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001695472,0.0002578244,0.007307381,0.000009876185,0.00005576002,0.0001828803,0.0002978311,0.00007014463,0.9905269,0.00003314562,0.0001704172,0.0009183384],"study_design_scores_gemma":[0.004197099,0.002247031,0.03676951,0.00006632804,0.0002370935,0.05135849,0.007495028,0.0001533966,0.8884097,0.005946543,0.002680616,0.0004391868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974133,0.00057567,0.001013341,0.0001569453,0.0002278822,0.0003525123,0.000005617297,0.0000049368,0.0002497429],"genre_scores_gemma":[0.9988871,0.0004383086,0.00005983946,0.0002827465,0.0001425124,0.00001742881,0.000001296699,0.00001640646,0.0001544088],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1021172,"threshold_uncertainty_score":0.3738824,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008918263756065394,"score_gpt":0.2200609591743457,"score_spread":0.2111426954182803,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}