{"id":"W2159731247","doi":"10.1017/s0031182008005015","title":"Mitochondrial DNA sequence variation among geographical isolates of <i>Opisthorchis viverrini</i> in Thailand and Lao PDR, and phylogenetic relationships with other trematodes","year":2008,"lang":"en","type":"article","venue":"Parasitology","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Wellcome Trust","keywords":"Biology; Opisthorchis viverrini; Clonorchis sinensis; Mitochondrial DNA; Phylogenetic tree; Haplotype; Genetics; Genetic variation; Nucleic acid sequence; Opisthorchis; Sequence analysis; Gene; Phylogenetics; Liver fluke; Zoology; Genotype; Helminths","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007672964,0.0001377426,0.0002931048,0.0001725063,0.0001676163,0.000005830691,0.00006608158,0.0002520396,0.00004859054],"category_scores_gemma":[0.00005057468,0.0001163882,0.00002764944,0.0001324254,0.0007964858,0.00009091098,0.00002352993,0.0002806365,0.00001014966],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000832244,"about_ca_system_score_gemma":0.00002434399,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001185065,"about_ca_topic_score_gemma":0.003324053,"domain_scores_codex":[0.9989733,0.0002764049,0.0002521999,0.0002747156,0.00002115376,0.0002022378],"domain_scores_gemma":[0.999298,0.0003701884,0.0001337265,0.0001382021,0.0000343918,0.00002546189],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002044027,0.00006244762,0.9176592,0.000008959137,0.00006927682,0.000006317557,0.000904872,0.00001619543,0.08017536,0.0008320185,0.00002699973,0.0000340131],"study_design_scores_gemma":[0.0009598447,0.0001876191,0.9946937,0.00003119998,0.00004056001,0.0005371327,0.00006513037,0.00005038233,0.002665536,0.0003202825,0.0003229059,0.0001256965],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978486,0.0007995167,0.0003361741,0.00008839103,0.0001178614,0.0001831252,0.00002294656,0.00001782633,0.0005855607],"genre_scores_gemma":[0.9991714,0.0001857779,0.0003968831,0.00002528558,0.00001588393,0.00002601619,0.00001927021,0.000009355009,0.0001501815],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07750982,"threshold_uncertainty_score":0.4746174,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02105616372878273,"score_gpt":0.2683266794459263,"score_spread":0.2472705157171436,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}