{"id":"W2159946869","doi":"10.1038/nature08696","title":"The sequence and de novo assembly of the giant panda genome","year":2009,"lang":"en","type":"article","venue":"Nature","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1222,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Toronto","funders":"National Human Genome Research Institute; Strategic Research Council; National Natural Science Foundation of China; Shenzhen Government","keywords":"Contig; Genome; Sequence assembly; Biology; DNA sequencing; Genetics; Hybrid genome assembly; Whole genome sequencing; Genome size; Reference genome; Computational biology; Gene; Evolutionary biology; Transcriptome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005800608,0.0009043257,0.0006808395,0.001081068,0.0010919,0.001280764,0.0006245194,0.0007504177,0.001912217],"category_scores_gemma":[0.001459688,0.0006315591,0.00128552,0.001210903,0.0003470496,0.0006070154,0.0007575296,0.001563984,0.001931877],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005720837,"about_ca_system_score_gemma":0.00154172,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00538337,"about_ca_topic_score_gemma":0.006930682,"domain_scores_codex":[0.9995404,0.00007548755,0.00004549329,0.0001746889,0.0001179824,0.00004591117],"domain_scores_gemma":[0.9994069,0.0001079715,0.0001113448,0.0001083248,0.0001882665,0.00007712498],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006572983,0.0001665874,0.008108336,0.001012427,0.0002732165,0.001901648,0.0008307319,0.009688917,0.8412714,0.004820521,0.006655431,0.1246136],"study_design_scores_gemma":[0.0002809526,0.001050941,0.0936107,0.0003533743,0.001137793,0.004438123,0.001046491,0.1252265,0.423041,0.010841,0.3385499,0.0004230884],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.4506946,0.005451623,0.4859232,0.001808564,0.001062736,0.00111213,0.03329181,0.007678987,0.01297643],"genre_scores_gemma":[0.307889,0.00293068,0.6093697,0.0003728685,0.0001432833,0.0006655144,0.07062948,0.001056766,0.006942654],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.00538337,"threshold_uncertainty_score":0.0107041,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006415749380643055,"score_gpt":0.2412707267869758,"score_spread":0.2348549774063328,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}