{"id":"W2160009496","doi":"10.1002/gepi.21882","title":"Informed Genome‐Wide Association Analysis With Family History As a Secondary Phenotype Identifies Novel Loci of Lung Cancer","year":2015,"lang":"en","type":"article","venue":"Genetic Epidemiology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; University of British Columbia; Public Health Ontario; Princess Margaret Cancer Centre; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"National Cancer Institute; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Deutsche Krebshilfe; World Health Organization","keywords":"Genome-wide association study; Lung cancer; Expression quantitative trait loci; Genetic association; Biology; Family history; Cancer; Genetics; Quantitative trait locus; Single-nucleotide polymorphism; Oncology; Medicine; Internal medicine; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001876478,0.0002997624,0.000970188,0.0002301406,0.00006464012,0.000004727013,0.0003406882,0.0005419077,0.0001306115],"category_scores_gemma":[0.006101188,0.0002730672,0.0002681742,0.0003268954,0.0002069042,0.000007892797,0.0001570016,0.0002058489,0.00001674134],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005578129,"about_ca_system_score_gemma":0.001562528,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001792897,"about_ca_topic_score_gemma":0.002249039,"domain_scores_codex":[0.9969885,0.0005229174,0.001021671,0.0006201589,0.0001983816,0.0006483571],"domain_scores_gemma":[0.996704,0.0007432112,0.001156434,0.0005894883,0.00057637,0.0002304488],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001325814,0.00006037986,0.938476,0.00004111243,0.002376333,0.000001224675,0.0002953566,0.01630862,0.006926197,0.00004978017,0.03489155,0.0004409204],"study_design_scores_gemma":[0.00108065,0.0003899878,0.9477009,0.000008499361,0.0009259487,0.0000042742,0.000215944,0.0008802112,0.0002095314,0.0003921686,0.04783671,0.0003551583],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9560835,0.01635751,0.02350388,0.0008604564,0.0003787039,0.0003019644,0.00009366628,0.00002103669,0.002399325],"genre_scores_gemma":[0.9714341,0.002108492,0.01692532,0.004976451,0.0003067849,0.0001569543,0.0007824604,0.00004406117,0.003265411],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01542841,"threshold_uncertainty_score":0.9999722,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02677112398569987,"score_gpt":0.2919136937802921,"score_spread":0.2651425697945923,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}