{"id":"W2160425009","doi":"10.1099/jmm.0.005678-0","title":"The subcutaneous inoculation of pH 6 antigen mutants of Yersinia pestis does not affect virulence and immune response in mice","year":2008,"lang":"en","type":"article","venue":"Journal of Medical Microbiology","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"University of Kentucky","keywords":"Virulence; Yersinia pestis; Operon; Complementation; Mutant; Biology; Microbiology; Antigen; Mutagenesis; Pilus; Strain (injury); Immune system; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001715186,0.0001057234,0.0003247184,0.0001135484,0.00005260342,0.000004296583,0.0003616712,0.0002840698,0.00002109459],"category_scores_gemma":[0.001864666,0.00006656822,0.00008061986,0.0001104161,0.0007421126,0.000005828083,0.0001281357,0.0002856107,0.000001121422],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002119733,"about_ca_system_score_gemma":0.0003044949,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005810425,"about_ca_topic_score_gemma":0.00004520209,"domain_scores_codex":[0.9982191,0.0006177719,0.0006000252,0.0001517837,0.0001869705,0.0002242972],"domain_scores_gemma":[0.9986794,0.0005380763,0.0003736692,0.0001543605,0.0001677612,0.00008671839],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.005295365,0.00006429773,0.01910506,0.00002022635,0.00005041236,0.0001697222,0.000141696,0.000004146725,0.9742,0.000001710988,0.00004981504,0.0008976308],"study_design_scores_gemma":[0.001044279,0.001484085,0.2164278,0.00009114656,0.000009591231,0.005815742,0.00006215079,0.0000273029,0.7744259,0.000006309943,0.0005270612,0.00007862256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970205,0.001852121,0.00004040145,0.0008029838,0.0001557579,0.00009650278,0.00002366212,9.858743e-7,0.000007024489],"genre_scores_gemma":[0.9966276,0.003053899,0.0001763283,0.00004719238,0.00005583917,6.650418e-7,0.000006879008,0.000007888743,0.00002370623],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.199774,"threshold_uncertainty_score":0.2734345,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009666612209349595,"score_gpt":0.2817506716311545,"score_spread":0.2720840594218049,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}