{"id":"W2160581770","doi":"10.1128/aem.03067-12","title":"Genetic Relationships of Vibrio parahaemolyticus Isolates from Clinical, Human Carrier, and Environmental Sources in Thailand, Determined by Multilocus Sequence Analysis","year":2013,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Vibrio parahaemolyticus; Biology; Multilocus sequence typing; Horizontal gene transfer; Genetic diversity; Shrimp; Genetics; Vibrio; Phylogenetic tree; Population; Locus (genetics); Microbiology; Genotype; Gene; Bacteria; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002606403,0.0002497149,0.0002027096,0.0007222308,0.0003722432,0.0005887159,0.0001441866,0.0002636513,0.000426789],"category_scores_gemma":[0.0009516395,0.000164419,0.000159867,0.0006278337,0.000339661,0.0001739703,0.000345238,0.0002345501,0.0001177604],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001998531,"about_ca_system_score_gemma":0.00030323,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005321793,"about_ca_topic_score_gemma":0.003992724,"domain_scores_codex":[0.9996978,0.00006710615,0.00004392426,0.00007844098,0.00006232652,0.00005034606],"domain_scores_gemma":[0.9993225,0.0001646073,0.0001602432,0.00002970092,0.0001399541,0.0001829475],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003829354,0.0000899967,0.9506454,0.0001122027,0.00006262921,0.001668455,0.003016247,0.0002920853,0.03654436,0.00003849766,0.0001436045,0.007003651],"study_design_scores_gemma":[0.00002644146,0.0003999224,0.9853876,0.00003932885,0.0000587944,0.004726083,0.00436322,0.0005739867,0.003644051,0.00004981894,0.0007127471,0.00001795678],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996325,0.00008936955,0.00006836815,0.00001135217,0.000001227939,0.000004732141,0.0001108649,0.00000119056,0.00008040095],"genre_scores_gemma":[0.9990903,0.0001377001,0.0001572854,0.00001681441,0.000004304044,0.000006681993,0.0004802129,0.000001984286,0.0001047014],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005321793,"threshold_uncertainty_score":0.01058167,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01358391817164683,"score_gpt":0.2407548752996427,"score_spread":0.2271709571279959,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}