{"id":"W2160665358","doi":"10.1186/1471-2164-15-963","title":"Whole genome sequencing of Turkish genomes reveals functional private alleles and impact of genetic interactions with Europe, Asia and Africa","year":2014,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"FP7 Research Potential of Convergence Regions; Boğaziçi Üniversitesi; Türkiye Bilimsel ve Teknolojik Araştırma Kurumu","keywords":"Biology; Locus (genetics); Genetics; Demographic history; Genetic variation; Evolutionary biology; Allele frequency; Allele; Population; Population genetics; Genome; Turkish; Gene; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001618066,0.000130011,0.0001842545,0.00006160556,0.00005019217,0.00001719147,0.00009318504,0.00004857804,0.00001704691],"category_scores_gemma":[0.00003938976,0.0001055758,0.00004746997,0.00007805392,0.0002162775,0.000004039238,0.0001312456,0.00006313183,0.000001173586],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001518105,"about_ca_system_score_gemma":0.0001406387,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002940246,"about_ca_topic_score_gemma":0.0000305006,"domain_scores_codex":[0.9991731,0.00006229484,0.0002266479,0.0002571972,0.00009888738,0.0001818937],"domain_scores_gemma":[0.9993575,0.00002744886,0.000125095,0.000251735,0.0001487366,0.00008954401],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001255437,0.00001786711,0.05358589,0.00005085603,0.00010687,4.68907e-7,0.0001271494,0.002374322,0.9422508,0.00006201934,0.0001453882,0.001152746],"study_design_scores_gemma":[0.001290601,0.001871596,0.937044,0.00003494533,0.00008689128,0.0001389502,0.0003396111,0.001552053,0.04226666,0.0004915235,0.01446759,0.0004156162],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921876,0.001404173,0.00523343,0.00001369274,0.00001695273,0.000147166,0.00004644029,0.000002742532,0.0009478361],"genre_scores_gemma":[0.9886936,0.0003186547,0.0103092,0.000008318233,0.00008504045,0.0000056665,0.00004687427,0.00002102288,0.0005116063],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8999842,"threshold_uncertainty_score":0.4305255,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02148964515522642,"score_gpt":0.2538077010168086,"score_spread":0.2323180558615821,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}