{"id":"W2160724408","doi":"10.1094/mpmi-02-13-0036-r","title":"Deletion of the <i>Phytophthora sojae</i> Avirulence Gene <i>Avr1d</i> Causes Gain of Virulence on <i>Rps</i>1d","year":2013,"lang":"en","type":"article","venue":"Molecular Plant-Microbe Interactions","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Phytophthora sojae; Effector; Biology; Virulence; Oomycete; Gene; Genetics; Pathogen; Population; Cell biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009979444,0.000186868,0.0002237989,0.00002279639,0.0001733117,0.00003510268,0.0004163517,0.00008270663,0.0001872782],"category_scores_gemma":[0.00004611953,0.00007541666,0.0001968775,0.0003027733,0.0001189741,0.0001238381,0.0000887412,0.0002083488,0.00005887917],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002581381,"about_ca_system_score_gemma":0.00001560259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004727641,"about_ca_topic_score_gemma":0.0003376469,"domain_scores_codex":[0.9987003,0.0001341366,0.0003723711,0.0002989323,0.0002392106,0.0002551161],"domain_scores_gemma":[0.9991496,0.0001810326,0.0002955473,0.0001781169,0.0001329316,0.00006282082],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002624138,0.0001411507,0.0003811906,0.00001310103,0.0000196677,0.000008465301,0.0000155356,0.000114463,0.9960644,0.0001738415,0.001681043,0.001360876],"study_design_scores_gemma":[0.00007688475,0.00008772889,0.01495408,0.0002082625,0.00002326441,0.00008820611,0.00005096774,0.00006545238,0.976086,0.0001567481,0.008037565,0.0001649058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965282,0.0001857712,0.00009289048,0.0006337123,0.0002946002,0.0002991131,0.001049377,0.00002622446,0.0008901029],"genre_scores_gemma":[0.998522,0.0001336587,0.0002456426,0.0006329128,0.00004941876,0.00002936946,0.00008594845,0.000002516397,0.0002984665],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01997849,"threshold_uncertainty_score":0.3075402,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009668319666364044,"score_gpt":0.1969172256092775,"score_spread":0.1872489059429134,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}