{"id":"W2160781470","doi":"10.1016/j.jmb.2006.02.008","title":"Detecting Molecular Interactions that Stabilize Native Bovine Rhodopsin","year":2006,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":74,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Volkswagen Foundation; Deutsche Forschungsgemeinschaft; European Commission","keywords":"Rhodopsin; Chemistry; Biophysics; Computational biology; Biology; Biochemistry; Retinal","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002873158,0.0002121061,0.0002119646,0.0001468903,0.0004054914,0.000482622,0.0003783442,0.0005741401,0.002738145],"category_scores_gemma":[0.0006299699,0.0002213478,0.0001698832,0.0001052791,0.000433214,0.0003852678,0.0002887944,0.0008846906,0.0002599749],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004658403,"about_ca_system_score_gemma":0.0001655978,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004921383,"about_ca_topic_score_gemma":0.001187978,"domain_scores_codex":[0.9997594,0.00003077444,0.000008540288,0.00005289802,0.00005343436,0.00009503002],"domain_scores_gemma":[0.9995556,0.0001445867,0.00008735339,0.00003575402,0.00003619007,0.0001404833],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001355941,0.00002306332,0.000227036,0.00001328204,0.000005716602,0.00003391744,0.00002268906,0.00004355472,0.9988514,0.0001402157,0.00005703927,0.0004464875],"study_design_scores_gemma":[0.00007485559,0.0003340049,0.004010518,0.000004252485,0.00001519247,0.0001312995,0.00006776378,0.001622574,0.99312,0.0001075336,0.0005029017,0.000009259264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978901,0.0001783936,0.0009669182,0.00008364864,0.0000226195,0.000008332869,0.0000242178,0.00003160163,0.00079422],"genre_scores_gemma":[0.9985602,0.00005766284,0.000677712,0.00008489253,0.000006383861,0.000006084799,0.00004926664,0.00001375944,0.0005440324],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002738145,"threshold_uncertainty_score":0.009160042,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04130652294547856,"score_gpt":0.3606661581361516,"score_spread":0.3193596351906731,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}