{"id":"W2161036972","doi":"10.1128/jvi.05262-11","title":"Reassortment Events among Swine Influenza A Viruses in China: Implications for the Origin of the 2009 Influenza Pandemic","year":2011,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Public Health Service; National Institutes of Health; University of Hong Kong; National Institute of Allergy and Infectious Diseases; Institute of Infection and Immunity; Li Ka Shing Foundation","keywords":"Reassortment; Biology; Pandemic; Virology; H5N1 genetic structure; Virus; Lineage (genetic); Influenza A virus; Influenza A virus subtype H5N1; Antigenic shift; Viral evolution; Genome; Antigenic drift; Genetics; Gene; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006838546,0.0002837968,0.0002393922,0.0008824298,0.0008329072,0.000361719,0.0002523549,0.0003340273,0.0005857638],"category_scores_gemma":[0.0006874062,0.0001564261,0.0003102932,0.0008302242,0.0004145344,0.0004219025,0.0002715676,0.0002253476,0.0001031878],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001215473,"about_ca_system_score_gemma":0.0009531898,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0191473,"about_ca_topic_score_gemma":0.02003711,"domain_scores_codex":[0.9998048,0.00003214506,0.0000175958,0.00004377339,0.00003369313,0.00006796671],"domain_scores_gemma":[0.9994944,0.0001036588,0.000172942,0.00004670376,0.00008781678,0.00009444592],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003208603,0.00004850954,0.9397214,0.00004261445,0.00005212768,0.0008306851,0.001584755,0.0008713366,0.04422508,0.0002989973,0.0001509933,0.01185264],"study_design_scores_gemma":[0.000007679979,0.00008613018,0.9962021,0.000007759933,0.00002218333,0.0003108647,0.0004779193,0.0009061551,0.001496063,0.0001277066,0.0003462681,0.000009247802],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994286,0.0001710955,0.00007365213,0.00003512582,0.000002521946,0.000005247753,0.00004199342,0.000001379229,0.0002402897],"genre_scores_gemma":[0.9995053,0.0001237707,0.00008450844,0.00002442919,0.000005422647,0.000004439998,0.0001363307,9.314722e-7,0.0001148623],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0191473,"threshold_uncertainty_score":0.03807169,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1847423777271131,"score_gpt":0.428408455532196,"score_spread":0.2436660778050829,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}