{"id":"W2161588314","doi":"10.4049/jimmunol.173.11.6858","title":"Gene Expression Profiling of Host Response in Models of Acute HIV Infection","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":97,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; University of Toronto; University Health Network; Royal Victoria Hospital; McGill University Health Centre; Royal Victoria Regional Health Centre; Western University","funders":"Health Canada","keywords":"Biology; Innate immune system; Virology; Gene; CD14; Immunity; Gene expression profiling; Viral replication; Interferon; Immunology; Virus; Acquired immune system; Gene expression; Immune system; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001927855,0.0002234829,0.0005286922,0.0004038718,0.0002255238,0.0003866645,0.0001575768,0.0002890269,0.0008145995],"category_scores_gemma":[0.0001688729,0.0001331722,0.0002552377,0.0005482819,0.000199978,0.0001516255,0.000170143,0.0005819108,0.0002268067],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003117366,"about_ca_system_score_gemma":0.0001985108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005286809,"about_ca_topic_score_gemma":0.0008927874,"domain_scores_codex":[0.9997838,0.00002796521,0.00001120705,0.00005409299,0.00005466088,0.00006821164],"domain_scores_gemma":[0.9998605,0.00004224544,0.00003548172,0.00001423485,0.00002168158,0.00002574553],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003497196,0.00006551786,0.002249328,0.00006193919,0.0000104089,0.00002890371,0.00002883073,0.0001490987,0.9955729,0.00002530633,0.00004853594,0.001409314],"study_design_scores_gemma":[0.00004685426,0.002404575,0.1555991,0.00002531943,0.0001010094,0.0004184357,0.0002510674,0.005715208,0.8326312,0.000220902,0.002558744,0.00002751776],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929945,0.001319207,0.002786341,0.00005052476,0.00001679036,0.00007719175,0.002212964,0.00005597095,0.0004864937],"genre_scores_gemma":[0.9815538,0.001766415,0.008822957,0.0001250319,0.00002308797,0.0004393909,0.005192911,0.00002827052,0.002048129],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008145995,"threshold_uncertainty_score":0.002725065,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01778569072762695,"score_gpt":0.2777532918755534,"score_spread":0.2599676011479264,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}