{"id":"W2161725470","doi":"10.1128/iai.01425-08","title":"<i>Campylobacter jejuni</i> Glycosylation Island Important in Cell Charge, Legionaminic Acid Biosynthesis, and Colonization of Chickens","year":2009,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":134,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences; Institute for Marine Biosciences","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Campylobacter jejuni; Flagellin; Biology; Complementation; Flagellum; Microbiology; Mutant; Glycosylation; Gene; Pathogen; Glycan; Locus (genetics); Strain (injury); Genetics; Bacteria; Glycoprotein","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003346126,0.0001025244,0.0001862846,0.00003090187,0.0001017892,0.00001658501,0.00004043869,0.0001273312,0.0001092536],"category_scores_gemma":[0.000066379,0.00005021315,0.00003143356,0.0002241422,0.0000629341,0.0001267746,0.00002088915,0.0001142758,0.000002868017],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001261263,"about_ca_system_score_gemma":0.000004902296,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000710018,"about_ca_topic_score_gemma":0.001086116,"domain_scores_codex":[0.999202,0.0001735659,0.0002844065,0.0001525229,0.00005215522,0.0001353855],"domain_scores_gemma":[0.9996101,0.0001100285,0.000151737,0.00004682707,0.00003970664,0.00004161182],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005216815,0.0001746133,0.6578158,0.000007458703,0.000003898091,5.13495e-7,0.0001123602,5.475309e-7,0.3286315,0.0001410924,0.00005125595,0.01300889],"study_design_scores_gemma":[0.0001988627,0.0003616499,0.9839118,0.0000145896,0.000007528839,0.0000110686,0.00002890837,0.00008456709,0.01301728,0.0007195343,0.001547562,0.00009666467],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983869,0.0003902721,0.000006695123,0.0003979667,0.00006547139,0.0001233408,0.00001280824,0.00002132589,0.0005952262],"genre_scores_gemma":[0.9974289,0.002209242,0.00000919871,0.0002251882,0.00003659792,0.000002529861,0.00006426408,6.268643e-7,0.00002345593],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3260961,"threshold_uncertainty_score":0.2047633,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01236844376290824,"score_gpt":0.2173049578324587,"score_spread":0.2049365140695504,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}