{"id":"W2161865728","doi":"10.1128/jcm.42.8.3594-3599.2004","title":"Genomic Analysis Distinguishes <i>Mycobacterium africanum</i>","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":103,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research; Wellcome Trust; McGill University; Novartis Foundation; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Biology; Mycobacterium tuberculosis; Mycobacterium tuberculosis complex; Tuberculosis; Genetics; genomic DNA; Phylogenetics; Sequence analysis; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001080637,0.0001723321,0.0001358543,0.0006525313,0.0001351003,0.0002484136,0.0001245152,0.0002847562,0.0008084876],"category_scores_gemma":[0.0004495686,0.00008309927,0.0001677383,0.0003625982,0.0001987477,0.0001068655,0.0001942847,0.0002206459,0.0002880613],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000777845,"about_ca_system_score_gemma":0.00007469179,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008027446,"about_ca_topic_score_gemma":0.000706506,"domain_scores_codex":[0.99988,0.00002396272,0.000007668988,0.00003797519,0.00002066697,0.00002983307],"domain_scores_gemma":[0.9998196,0.00006210447,0.00005105297,0.00002018481,0.00002684165,0.00002038083],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001241177,0.00001871582,0.012119,0.00004352562,0.000008093063,0.000113838,0.00008221298,0.00003881822,0.9839476,0.00005841583,0.00003088213,0.003414763],"study_design_scores_gemma":[0.00001554977,0.0009326148,0.6103416,0.00004423815,0.0001032696,0.003424289,0.0008135939,0.001054486,0.3759351,0.0003126372,0.007009254,0.00001330221],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955333,0.0006101876,0.001829497,0.00007282434,0.000008914675,0.0000228438,0.000898562,0.00002347461,0.001000362],"genre_scores_gemma":[0.993897,0.0003649592,0.003313879,0.00007523391,0.00001622133,0.00001790162,0.001932254,0.000008511905,0.0003740502],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008084876,"threshold_uncertainty_score":0.00270462,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05901758583494773,"score_gpt":0.406779132883308,"score_spread":0.3477615470483603,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}