{"id":"W2161929132","doi":"10.1099/mic.0.2007/013409-0","title":"Regulation of hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) metabolism in Shewanella halifaxensis HAW-EB4 by terminal electron acceptor and involvement of c-type cytochrome","year":2008,"lang":"en","type":"article","venue":"Microbiology","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Periplasmic space; Cytochrome; Chemistry; Electron acceptor; Biochemistry; Shewanella; Ferredoxin; Metabolism; Trimethylamine; Bacteria; Biology; Enzyme; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001742638,0.0002141537,0.0004651083,0.0001109234,0.00005030144,0.000003575217,0.0001606674,0.0001463991,0.0004825036],"category_scores_gemma":[0.00001092314,0.0001854023,0.00006723793,0.0002571314,0.0004201314,0.00009313464,0.0001491373,0.0000952141,0.00003457507],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009477243,"about_ca_system_score_gemma":0.00001944158,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005551089,"about_ca_topic_score_gemma":0.00008906914,"domain_scores_codex":[0.9986022,0.0001297598,0.0004617166,0.0003765872,0.00008853774,0.0003411778],"domain_scores_gemma":[0.9994729,0.00003995503,0.0001931981,0.0002198908,0.00001663385,0.00005746469],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002140001,0.0001783139,0.0252199,0.00001211997,0.00003873796,0.000009115845,0.0002736001,0.00002590932,0.9729732,0.000007185032,0.0008814996,0.0001663612],"study_design_scores_gemma":[0.001538509,0.0003473474,0.08090757,0.00000908834,0.00004208822,0.0001418442,0.00002364113,0.00003308603,0.9148076,0.00007431265,0.001899915,0.0001750269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998794,0.0006392352,0.000005813415,0.00006014382,0.00006366416,0.0002906915,0.00004424765,0.00001228191,0.00008998416],"genre_scores_gemma":[0.9975661,0.0001564347,0.001571235,0.0000427246,0.00002320634,0.000007326527,0.0001825708,0.00001507029,0.0004353288],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05816568,"threshold_uncertainty_score":0.7560487,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009891794479089873,"score_gpt":0.2072923189449812,"score_spread":0.1974005244658914,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}