{"id":"W2162210817","doi":"10.1101/gr.640303","title":"Genome Duplication, a Trait Shared by 22,000 Species of Ray-Finned Fish","year":2003,"lang":"en","type":"article","venue":"Genome Research","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":892,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Biology; Zebrafish; Takifugu rubripes; Synteny; Gene duplication; Danio; Genetics; Genome; Fugu; Gene; Phylogenetics; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006479685,0.0001026211,0.0001658449,0.00003157027,0.0003288626,0.00006991237,0.0004017927,0.00008921027,0.01392011],"category_scores_gemma":[0.0001366237,0.00004691007,0.00007767649,0.0007727231,0.0001319817,0.00005694507,0.00007289692,0.0001515559,0.0001249021],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004571417,"about_ca_system_score_gemma":0.00003339862,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001597879,"about_ca_topic_score_gemma":0.0001411464,"domain_scores_codex":[0.9983012,0.0001926282,0.0002643157,0.0003299947,0.0004752016,0.0004366354],"domain_scores_gemma":[0.9992049,0.0002129762,0.000040356,0.000126659,0.0002686867,0.0001464251],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000009279417,0.0001363449,0.0007329163,0.000008399797,0.00001459572,6.267069e-7,0.0001786921,0.000005411318,0.9956064,0.0006883877,0.001398503,0.001220494],"study_design_scores_gemma":[0.0001781609,0.000234876,0.4934963,0.000004834485,0.000004372937,0.000002820606,0.0003626096,0.000005735414,0.01572574,0.001434121,0.4884105,0.0001398656],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9811205,0.0004677007,0.000009945019,0.00264332,0.0000240321,0.0003885702,0.0008055518,0.0000255295,0.01451487],"genre_scores_gemma":[0.991313,0.0001855076,0.0001403197,0.00005453094,0.0001212282,0.00006367075,0.0003496884,0.000001615014,0.007770473],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9798806,"threshold_uncertainty_score":0.9869813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06485210548497149,"score_gpt":0.2829716606480334,"score_spread":0.2181195551630619,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}