{"id":"W2162221719","doi":"10.1128/aem.68.6.3055-3066.2002","title":"Extensive Profiling of a Complex Microbial Community by High-Throughput Sequencing","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":130,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Plant Biotechnology Institute","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Profiling (computer programming); Computational biology; DNA sequencing; Throughput; Biology; Metagenomics; Computer science; Genetics; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000962571,0.0005261001,0.000639568,0.00126908,0.0005098141,0.0009681451,0.0003373597,0.0005477543,0.0004291522],"category_scores_gemma":[0.001280454,0.0002373036,0.0006141142,0.00129738,0.000290726,0.000625558,0.0005260221,0.0005310268,0.0005166893],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002191301,"about_ca_system_score_gemma":0.0004190293,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005006259,"about_ca_topic_score_gemma":0.0008588928,"domain_scores_codex":[0.9988915,0.00028006,0.0000733236,0.000258286,0.0004092776,0.00008749037],"domain_scores_gemma":[0.9992492,0.0002763934,0.0001528583,0.00009307614,0.0001520134,0.00007653957],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008314627,0.00005573596,0.003701578,0.0001825074,0.00004773191,0.00005773584,0.00005834331,0.0006186495,0.9817323,0.0001097341,0.00007941201,0.01327312],"study_design_scores_gemma":[0.00003713393,0.0008300449,0.1295798,0.0001281968,0.000282498,0.0008878557,0.0003429982,0.02255237,0.8332798,0.001697298,0.01030405,0.00007781864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8291801,0.002823055,0.1597895,0.0001912365,0.00005040817,0.0003558898,0.005016341,0.0007463146,0.00184705],"genre_scores_gemma":[0.716126,0.004924908,0.264633,0.0002771452,0.00006747459,0.0005175522,0.01139997,0.0001647483,0.00188924],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00126908,"threshold_uncertainty_score":0.005090594,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01468445214407933,"score_gpt":0.1851023446165817,"score_spread":0.1704178924725023,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}