{"id":"W2162221719","doi":"10.1128/aem.68.6.3055-3066.2002","title":"Extensive Profiling of a Complex Microbial Community by High-Throughput Sequencing","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":130,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan; Plant Biotechnology Institute","funders":"Ministry of Agriculture - Saskatchewan","keywords":"Profiling (computer programming); Computational biology; DNA sequencing; Throughput; Biology; Metagenomics; Computer science; Genetics; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006576929,0.0001607797,0.0002129345,0.00001472574,0.0001531935,0.000004008589,0.0001120003,0.0001218419,0.00002933965],"category_scores_gemma":[0.000003027923,0.0001578951,0.00003841268,0.00001757786,0.0004253298,5.015024e-7,0.0002592682,0.0001033941,0.000006620105],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000174706,"about_ca_system_score_gemma":0.000003619894,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004990255,"about_ca_topic_score_gemma":0.00000602103,"domain_scores_codex":[0.999287,0.00005187033,0.000194662,0.000241707,0.00001825526,0.0002065149],"domain_scores_gemma":[0.9996527,0.00001585374,0.00008737038,0.0002046555,0.000004766371,0.0000346765],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001806108,0.00006384762,0.0006761037,0.00001193967,0.00006580786,3.341417e-7,0.0001862065,0.00001528172,0.9973221,0.00004996222,0.001036969,0.000553328],"study_design_scores_gemma":[0.0007071067,0.0002381854,0.001365724,0.00000297465,0.00002311287,0.00004743438,0.00084153,0.000007765739,0.9899951,0.00007975451,0.006482585,0.0002087073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976594,0.001255162,0.0001028864,0.00003331032,0.00004104794,0.0001670511,0.0003708318,0.000002372592,0.0003679518],"genre_scores_gemma":[0.9968522,0.000647183,0.001530503,0.000409957,0.00003872723,0.00001057507,0.000445993,0.00001550005,0.00004940497],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007327039,"threshold_uncertainty_score":0.6438777,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01468445214407933,"score_gpt":0.1851023446165817,"score_spread":0.1704178924725023,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}