{"id":"W2162730802","doi":"10.1093/gbe/evu279","title":"Comprehensive Transcriptome Analysis Reveals Accelerated Genic Evolution in a Tibet Fish, Gymnodiptychus pachycheilus","year":2014,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":120,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Major Research Plan; National Natural Science Foundation of China","keywords":"Biology; Zebrafish; Adaptation (eye); Evolutionary biology; Transcriptome; Gene; Genome; Local adaptation; Lineage (genetic); Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007538439,0.0002279724,0.0001960697,0.000679678,0.0003246057,0.0001777726,0.00008914033,0.0001602321,0.0007553452],"category_scores_gemma":[0.00009769602,0.0001369573,0.0002982822,0.0006877079,0.0002012583,0.0001701052,0.0002962572,0.0002214445,0.0001794657],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001979259,"about_ca_system_score_gemma":0.0002905063,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003180752,"about_ca_topic_score_gemma":0.006879854,"domain_scores_codex":[0.9999489,0.000002869253,0.000003058477,0.00002096722,0.00001244368,0.00001185479],"domain_scores_gemma":[0.9999421,0.000008617773,0.00001604477,0.000005434581,0.00001163425,0.00001605316],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001538236,0.00001123926,0.0194755,0.00009300468,0.00002644681,0.0001633116,0.0002504079,0.0001646867,0.9743212,0.00006483664,0.00008914724,0.005186371],"study_design_scores_gemma":[0.000009515276,0.0001308667,0.9835454,0.000009551005,0.0000536635,0.0002423619,0.0002040228,0.0006894566,0.01357911,0.00008347781,0.001441486,0.00001112795],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967475,0.0003140641,0.0007160115,0.00002385755,0.000003551909,0.000007289101,0.001692295,0.00002556521,0.0004699737],"genre_scores_gemma":[0.9855155,0.0005214064,0.002322775,0.0000733974,0.000008671719,0.00004031154,0.009378307,0.00002790541,0.002111713],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003180752,"threshold_uncertainty_score":0.00632447,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01406816269923471,"score_gpt":0.275327112157694,"score_spread":0.2612589494584593,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}