{"id":"W2162941392","doi":"10.1128/aem.00460-13","title":"Insights into the Assembly of the Alginate Biosynthesis Machinery in Pseudomonas aeruginosa","year":2013,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Toronto; Virginia Commonwealth University","keywords":"Periplasmic space; Multiprotein complex; Immunoprecipitation; Bacterial outer membrane; Biology; Operon; Inner membrane; Cell biology; Secretion; Biochemistry; Gene; Membrane; Escherichia coli","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005028603,0.0001330789,0.0001319925,0.00001824412,0.00008054572,0.000008499421,0.0001457787,0.0001400622,0.00001668466],"category_scores_gemma":[0.000003633279,0.00007508055,0.00004441942,0.00003388929,0.0003631758,0.000002676634,0.0002417985,0.00008277207,0.000011002],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009293191,"about_ca_system_score_gemma":0.000006539605,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000163223,"about_ca_topic_score_gemma":0.00004035046,"domain_scores_codex":[0.9993663,0.0000564867,0.0001643367,0.0002319382,0.00002140041,0.0001595766],"domain_scores_gemma":[0.9996601,0.00001828976,0.00006915905,0.0002276907,0.000001955335,0.00002275423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001328218,0.00002943252,0.001654518,0.000003836332,0.00001700822,2.097883e-7,0.0001077185,0.000002536448,0.9944711,0.00009593424,0.00009570814,0.003508718],"study_design_scores_gemma":[0.0002388497,0.00003698128,0.03671676,0.000004847347,0.000008118667,0.00001210971,0.0001991362,0.000005886362,0.9564911,0.00006578003,0.006111688,0.0001088092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985555,0.0004786706,0.000004076454,0.0003769726,0.00007506079,0.0002088624,0.000007470235,0.000002235822,0.0002911188],"genre_scores_gemma":[0.9990553,0.000211558,0.0001009708,0.0004781769,0.00003814609,0.00001302314,0.00004775952,0.00001030224,0.00004478476],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03798006,"threshold_uncertainty_score":0.3061696,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002579772237040711,"score_gpt":0.161658724462458,"score_spread":0.1590789522254173,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}