{"id":"W2163127726","doi":"10.1128/aem.01397-06","title":"An Integrated Approach to Functional Genomics: Construction of a Novel Reporter Gene Fusion Library for<i>Sinorhizobium meliloti</i>","year":2006,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":78,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Genomics Institute; Genome Canada","keywords":"Sinorhizobium meliloti; Biology; Reporter gene; Gene; Fusion gene; Plasmid; Genetics; Functional genomics; Genome; Genomic library; Operon; Molecular biology; Escherichia coli; Gene expression; Genomics; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006270708,0.0001463431,0.0001814424,0.00001768376,0.0001027135,0.00001461381,0.00008972255,0.0001406395,0.0000661765],"category_scores_gemma":[8.024792e-7,0.0000723279,0.00005017789,0.00006703725,0.0001484286,0.00006263206,0.00006741308,0.00005069704,0.000004034566],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002540564,"about_ca_system_score_gemma":0.000004561935,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005381506,"about_ca_topic_score_gemma":0.000006688379,"domain_scores_codex":[0.9991181,0.00001604621,0.0002573494,0.0003906182,0.00003130639,0.000186611],"domain_scores_gemma":[0.999748,0.00002807214,0.0001075884,0.00005940119,0.000003979997,0.000052981],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001055035,0.0002607968,0.002553376,0.000003050657,0.00001375305,1.326181e-7,0.00001646106,0.000004425721,0.9940846,0.0003151311,0.0003477067,0.002295057],"study_design_scores_gemma":[0.0005170407,0.0002665223,0.03612606,0.000002519532,0.00002912614,0.0001264385,0.0003053659,0.00001653922,0.9537203,0.0002329027,0.008411814,0.0002453423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982805,0.00003939485,0.0001750684,0.00007534483,0.00006686745,0.000349289,0.0007277285,0.00003525675,0.0002505392],"genre_scores_gemma":[0.9781432,0.000004382464,0.01627466,0.0002799359,0.0001221046,0.00004001771,0.005093451,0.00000319761,0.00003909889],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04036428,"threshold_uncertainty_score":0.2949446,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007441839216610568,"score_gpt":0.1535044779541197,"score_spread":0.1460626387375091,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}