{"id":"W2163266115","doi":"10.1261/rna.2126203","title":"ORF-less and reverse-transcriptase-encoding group II introns in archaebacteria, with a pattern of homing into related group II intron ORFs","year":2003,"lang":"en","type":"letter","venue":"RNA","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":96,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"Group II intron; ORFS; Intron; Biology; Group I catalytic intron; Genetics; Exon; Genome; RNA splicing; Minor spliceosome; Open reading frame; Reverse transcriptase; Retrotransposon; Gene; Mature messenger RNA; RNA; Peptide sequence; Transposable element","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002217375,0.0004500541,0.0006000331,0.0001928556,0.0002642258,0.0000494108,0.0003087429,0.0004673384,0.001472703],"category_scores_gemma":[0.00001313167,0.0004100834,0.0001084262,0.0002960078,0.0003749318,0.0004320924,0.0003271345,0.001545947,0.00002405274],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003998085,"about_ca_system_score_gemma":0.00001561281,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008912098,"about_ca_topic_score_gemma":0.003293741,"domain_scores_codex":[0.9977564,0.0001631376,0.0006013261,0.0007058017,0.0002250985,0.0005482669],"domain_scores_gemma":[0.9990948,0.00004768912,0.000344213,0.000410686,0.00001115314,0.0000914648],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001012293,0.0002171119,0.002822182,0.0003041956,0.0001363828,0.0002846551,0.006315053,0.00001228598,0.8762127,0.000009695455,0.09781611,0.01576847],"study_design_scores_gemma":[0.002547537,0.001249314,0.01960141,0.002227809,0.0003366618,0.0004273048,0.001036861,0.0000762022,0.003766942,0.0001228276,0.9668808,0.001726343],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9695698,0.00010094,0.0003320922,0.02782658,0.0006285205,0.0005845275,0.0001218149,0.00003957047,0.0007961434],"genre_scores_gemma":[0.9556916,0.000342083,0.001927645,0.03837034,0.0003488172,0.00008426098,0.0004849939,0.0001544158,0.002595784],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8724457,"threshold_uncertainty_score":0.9998351,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00698134764902705,"score_gpt":0.1963096175912338,"score_spread":0.1893282699422067,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}