{"id":"W2163345584","doi":"10.1111/1462-2920.12517","title":"Validation of a new catalysed reporter deposition–fluorescence <i>in situ</i> hybridization probe for the accurate quantification of marine <scp> <i>B</i> </scp> <i>acteroidetes</i> populations","year":2014,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Montréal","funders":"Ministerio de Ciencia e Innovación","keywords":"Biology; In situ; Fluorescence in situ hybridization; Fish <Actinopterygii>; In silico; Phylotype; Pyrosequencing; Ribosomal RNA; Marine fish; Molecular probe; Computational biology; 16S ribosomal RNA; Molecular biology; Genetics; Gene; Fishery","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004330976,0.000162356,0.0002604604,0.00004853049,0.0001476058,0.000006043991,0.0003195954,0.0001413619,0.0001757609],"category_scores_gemma":[0.0001309499,0.0001414608,0.0000855453,0.0001448279,0.0003811271,0.0001443226,0.0002178175,0.0001312542,0.00002732202],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007606061,"about_ca_system_score_gemma":0.0000119182,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003746909,"about_ca_topic_score_gemma":0.0007373036,"domain_scores_codex":[0.9985194,0.0002760553,0.0006092117,0.000311536,0.00004917532,0.0002346445],"domain_scores_gemma":[0.9985105,0.0004462056,0.0005497417,0.0004509567,0.000006877084,0.00003576657],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002881871,0.0001573616,0.03944959,0.00001216285,0.00001339648,1.592643e-7,0.0002892102,0.001551851,0.9562299,0.00006601152,0.001438085,0.0007635177],"study_design_scores_gemma":[0.0006102363,0.0001884457,0.1626051,0.00001060146,0.00005339908,0.00002697358,0.00006188377,0.0003657624,0.8313018,0.0006869327,0.004001125,0.00008771612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9714988,0.00002416357,0.02714297,0.0001557887,0.0001458759,0.0007576594,0.0000637786,0.00001183399,0.0001990611],"genre_scores_gemma":[0.9941224,0.00003012521,0.003322083,0.0002020786,0.00002394922,0.00004324815,0.002026574,0.00001484465,0.0002146796],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.124928,"threshold_uncertainty_score":0.5768603,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01742329433783694,"score_gpt":0.2315367365491871,"score_spread":0.2141134422113502,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}