{"id":"W2163481558","doi":"10.1128/iai.01373-10","title":"Impact of <i>Salmonella</i> Infection on Host Hormone Metabolism Revealed by Metabolomics","year":2011,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Biology; Salmonella enterica; Metabolomics; Host (biology); Salmonella; Salmonella infection; Transcriptome; Proteomics; Pathogen; Metabolome; Metabolic pathway; Computational biology; Microbiology; Metabolism; Bioinformatics; Bacteria; Gene; Genetics; Gene expression; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004360602,0.000180773,0.0003388732,0.00002972216,0.0001740292,0.00001408187,0.0000780713,0.0001758218,0.0002141913],"category_scores_gemma":[0.0001100259,0.00007581303,0.0001853854,0.0002868341,0.0001063087,0.000141294,0.00004944943,0.0002344313,0.00001979754],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002215856,"about_ca_system_score_gemma":0.000005800965,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02191206,"about_ca_topic_score_gemma":0.0001605439,"domain_scores_codex":[0.9988522,0.0003589115,0.0002984313,0.000200943,0.00007590179,0.0002136227],"domain_scores_gemma":[0.9993681,0.0001486194,0.0002073674,0.0000966057,0.00008360117,0.00009571466],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002209881,0.0003583215,0.4437945,0.000003327985,0.00008049146,3.118147e-7,0.0001036187,8.511902e-7,0.5410659,0.0001208604,0.001078365,0.01317256],"study_design_scores_gemma":[0.0002391934,0.0008877936,0.9864069,0.00000477496,0.00003662512,0.00001299655,0.00001319408,0.000007199675,0.009137659,0.000297235,0.002809741,0.0001467138],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962582,0.0005136512,0.00001129546,0.00002715285,0.0001700308,0.0001431381,0.00004365545,0.00006527897,0.002767594],"genre_scores_gemma":[0.9968008,0.002880319,0.00001240152,0.0001158649,0.00006598872,0.000009656425,0.00004888322,0.000001656466,0.00006441256],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5426124,"threshold_uncertainty_score":0.9846011,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03551804742793559,"score_gpt":0.2541000456411553,"score_spread":0.2185819982132197,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}