{"id":"W2163524749","doi":"10.1126/science.1132894","title":"Draft Genome Sequence of the Sexually Transmitted Pathogen <i>Trichomonas vaginalis</i>","year":2007,"lang":"en","type":"article","venue":"Science","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":840,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; U.S. National Library of Medicine; Chang Gung Medical Foundation; University of Glasgow; Directorate for Biological Sciences; Danmarks Tekniske Universitet; European Molecular Biology Laboratory; Wellcome Trust; Ellison Medical Foundation","keywords":"Biology; Genome; Trichomonas vaginalis; Genetics; Trichomonas; Gene; Transposable element; Whole genome sequencing; Horizontal gene transfer","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009206807,0.000078064,0.0000983783,0.00008876011,0.0003405543,0.00001040547,0.0004622343,0.00006579336,0.00007596619],"category_scores_gemma":[0.0002325319,0.00005371528,0.00004023447,0.0008704035,0.001385581,0.00009319843,0.00005368363,0.0001405263,0.00007726981],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003579958,"about_ca_system_score_gemma":0.0002502878,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005992085,"about_ca_topic_score_gemma":0.00002310732,"domain_scores_codex":[0.9991616,0.00003919739,0.0001872339,0.0001984606,0.00007559018,0.0003379253],"domain_scores_gemma":[0.9992776,0.0001808102,0.0000722465,0.0002956075,0.0001499854,0.00002373675],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000005416851,0.00004319927,0.01121326,0.000003256824,0.00000512465,0.00000311399,0.0003893474,0.00001356626,0.9852701,0.001992754,0.00003383437,0.001027026],"study_design_scores_gemma":[0.0004868878,0.000132941,0.4560606,0.00002190423,0.00003633794,0.0002207445,0.0002316652,0.000006410545,0.4820558,0.0008685928,0.05967469,0.0002034497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9891256,0.000595385,0.003384569,0.0001130225,0.0009903514,0.0001430253,0.00007002535,0.00002621334,0.005551796],"genre_scores_gemma":[0.9988621,0.00001550146,0.0001537102,0.0002902054,0.00001354467,0.000002514299,0.000005493031,0.000003364089,0.0006535026],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5032144,"threshold_uncertainty_score":0.510523,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01335235174834135,"score_gpt":0.2709228205572577,"score_spread":0.2575704688089163,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}