{"id":"W2163779088","doi":"10.1139/w11-022","title":"Validation and standardization of IS900 and F57 real-time quantitative PCR assays for the specific detection and quantification of<i>Mycobacterium avium</i>subsp.<i>paratuberculosis</i>","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Regione Piemonte","keywords":"Paratuberculosis; Biology; In silico; Real-time polymerase chain reaction; Mycobacterium; Computational biology; Microbiology; Virology; Genetics; Bacteria; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02365996,0.002118258,0.001448357,0.002226113,0.0006710764,0.00154532,0.002191368,0.002546573,0.0006483599],"category_scores_gemma":[0.03094308,0.001193308,0.001668307,0.001364097,0.002147852,0.0007272716,0.0009446375,0.001644594,0.0007029461],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009479997,"about_ca_system_score_gemma":0.001496214,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001768616,"about_ca_topic_score_gemma":0.002449304,"domain_scores_codex":[0.9559124,0.0147612,0.004039791,0.006814769,0.01714329,0.001328583],"domain_scores_gemma":[0.9800395,0.007503081,0.002249276,0.003119861,0.006836374,0.0002517903],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005513217,0.0005036305,0.008284061,0.0003594988,0.0001176636,0.00006947105,0.0006278753,0.001757249,0.9610946,0.0006151383,0.0002414252,0.02577801],"study_design_scores_gemma":[0.00008134666,0.001689849,0.01306225,0.0000844518,0.0002233464,0.0003734018,0.0001575272,0.00905596,0.9714053,0.0002397917,0.003558435,0.00006844322],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"methods","genre_scores_codex":[0.5454823,0.002080613,0.4436611,0.000264683,0.0005640101,0.003117141,0.001169669,0.0007944697,0.002865945],"genre_scores_gemma":[0.4085264,0.0009981523,0.5804638,0.0003014229,0.0001064957,0.003580922,0.003738993,0.0001905466,0.002093354],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.02365996,"threshold_uncertainty_score":0.1251273,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03735232309694629,"score_gpt":0.2668123367677614,"score_spread":0.2294600136708151,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}