{"id":"W2163950701","doi":"10.1186/1746-6148-8-178","title":"Genetic diversity and antimicrobial resistance among isolates of Escherichia coli O157: H7 from feces and hides of super-shedders and low-shedding pen-mates in two commercial beef feedlots","year":2012,"lang":"en","type":"article","venue":"BMC Veterinary Research","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Agriculture Food and Rural Development","funders":"","keywords":"Feces; Biology; Veterinary medicine; Pulsed-field gel electrophoresis; Escherichia coli; Microbiology; Feedlot; Restriction digest; Restriction enzyme; Animal science; Genotype; Genetics; DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008430968,0.000186159,0.0003459995,0.0001388679,0.0003863769,0.00003532943,0.000236015,0.000109043,0.00000837513],"category_scores_gemma":[0.0003343416,0.0001865426,0.00003866493,0.0002008417,0.001251941,0.00003864561,0.002724876,0.0002235419,3.662249e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001987447,"about_ca_system_score_gemma":0.00005446716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002131851,"about_ca_topic_score_gemma":0.001675862,"domain_scores_codex":[0.9980517,0.0004909857,0.0002690587,0.0003916459,0.0002545207,0.0005420743],"domain_scores_gemma":[0.9990742,0.0003095906,0.00007359373,0.0002396994,0.0001504864,0.0001523947],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005262767,0.00006892568,0.5316458,0.0002701335,0.00003589006,0.000003566697,0.0006977881,0.000001512166,0.466603,0.000003955012,0.00005511575,0.00008801898],"study_design_scores_gemma":[0.0009984286,0.0004454914,0.954352,0.000161132,0.00001303312,0.000004307382,0.001004396,0.000119426,0.04263561,0.00002976842,0.00005467473,0.0001817541],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934115,0.005998969,0.00001030588,0.0000422205,0.00003295167,0.0003507259,0.00005055812,0.000005181266,0.00009752971],"genre_scores_gemma":[0.9956328,0.002499807,0.001697882,0.000009487947,0.00007544164,0.00001744696,0.0000106192,0.0000202558,0.00003631247],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4239674,"threshold_uncertainty_score":0.7606987,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05359320491317138,"score_gpt":0.338886512662975,"score_spread":0.2852933077498037,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}