{"id":"W2164244344","doi":"10.1006/dbio.2001.0504","title":"Allele-Specific Non-CpG Methylation of the Nf1 Gene during Early Mouse Development","year":2001,"lang":"en","type":"article","venue":"Developmental Biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Biology; CpG site; Methylation; DNA methylation; Bisulfite sequencing; Genetics; Genomic imprinting; Epigenetics of physical exercise; RNA-Directed DNA Methylation; Allele; Epigenetics; Molecular biology; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002025723,0.0001741213,0.0001604704,0.00006180182,0.0001588721,0.000009929763,0.0002489203,0.0001939164,0.00004529313],"category_scores_gemma":[0.0000249419,0.0001393434,0.00006917412,0.0001513666,0.00009214618,0.000004306515,0.0002221927,0.0000795193,0.0000205228],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004917277,"about_ca_system_score_gemma":0.00009894315,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001744668,"about_ca_topic_score_gemma":0.0000380977,"domain_scores_codex":[0.9988183,0.00007100357,0.0003896801,0.0003432445,0.0001136043,0.0002642103],"domain_scores_gemma":[0.9994687,0.00001014136,0.0001552035,0.0002295294,0.00008194195,0.00005452276],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005280079,0.00003525095,0.07207848,0.000004871667,0.00004625582,6.853645e-7,0.0001680677,0.00002295947,0.9228539,0.0000265414,0.00002092847,0.004689193],"study_design_scores_gemma":[0.0003604067,0.00004271922,0.2209711,0.000003543039,0.000003032659,0.000004905709,0.0000294751,0.000002398005,0.7519014,0.00004164831,0.0264952,0.0001441979],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952941,0.000669169,0.002685464,0.00003930107,0.000166172,0.0002211629,0.000008273796,0.000009073178,0.0009072945],"genre_scores_gemma":[0.9920565,0.0005219045,0.006308195,0.00003858578,0.00008237806,0.00003807124,0.0001970298,0.00002010429,0.0007372664],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1709526,"threshold_uncertainty_score":0.5682259,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01349436424669085,"score_gpt":0.2302874150887238,"score_spread":0.2167930508420329,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}