{"id":"W2164314044","doi":"10.1128/aac.00247-09","title":"Molecular Characteristics of Extended-Spectrum-β-Lactamase-Producing <i>Escherichia coli</i> Isolates Causing Bacteremia in the Calgary Health Region from 2000 to 2007: Emergence of Clone ST131 as a Cause of Community-Acquired Infections","year":2009,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":145,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"Calgary Laboratory Services","keywords":"Microbiology; Multilocus sequence typing; Escherichia coli; Ciprofloxacin; Biology; clone (Java method); Gentamicin; Pulsed-field gel electrophoresis; Bacteremia; Plasmid; Molecular epidemiology; Genotype; Antibiotics; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002805738,0.0003179329,0.0003414345,0.0009767114,0.0002899396,0.0006374145,0.0003035514,0.0004199643,0.000481529],"category_scores_gemma":[0.001121574,0.0002659041,0.0002243627,0.0009612032,0.0003421566,0.0002638464,0.0002922244,0.0003847732,0.0001452365],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008503709,"about_ca_system_score_gemma":0.0004409565,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03056291,"about_ca_topic_score_gemma":0.02588813,"domain_scores_codex":[0.9997385,0.00002341436,0.00003161545,0.00006424384,0.00007065044,0.00007158311],"domain_scores_gemma":[0.999172,0.0001150059,0.0002865873,0.00002860836,0.0001941883,0.0002036637],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001781891,0.00006834956,0.9760754,0.00002408805,0.00003888599,0.0006876404,0.0003303094,0.0001708953,0.01946495,0.000008194664,0.00009542968,0.002857592],"study_design_scores_gemma":[0.000005145227,0.000130178,0.9983797,0.000004143278,0.00001401404,0.000439357,0.0001740194,0.00007168743,0.0006611913,0.000001662613,0.0001163354,0.000002664819],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996316,0.00008616992,0.00003148655,0.00001220359,0.000001841718,0.000006279319,0.0001125585,0.000001912961,0.0001159876],"genre_scores_gemma":[0.9989373,0.0001363201,0.0001255717,0.00004170747,0.000008292491,0.000006722346,0.0006117673,0.000002233291,0.0001300298],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9694371,"threshold_uncertainty_score":0.06077003,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01313199017238389,"score_gpt":0.2700192266618602,"score_spread":0.2568872364894763,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}