{"id":"W2164315014","doi":"10.1128/ec.00002-09","title":"Identification of the <i>Candida albicans</i> Cap1p Regulon","year":2009,"lang":"en","type":"article","venue":"Eukaryotic Cell","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":110,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Regulon; Chromatin immunoprecipitation; Transcription factor; Gene; Candida albicans; Genetics; Chromatin; Transcriptional regulation; Leucine zipper; Cell biology; Computational biology; Promoter; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002146866,0.00007900195,0.0001649305,0.00002309329,0.00006243005,0.000006492268,0.0001179889,0.00004843039,0.00008234681],"category_scores_gemma":[0.00006708681,0.00005396503,0.0001178834,0.0001886162,0.00009043977,0.00003862793,0.0000132953,0.0001118366,0.00002444899],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003634495,"about_ca_system_score_gemma":0.00013612,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005650485,"about_ca_topic_score_gemma":0.00002846506,"domain_scores_codex":[0.9991221,0.00003675355,0.0002822428,0.0001775722,0.0002460005,0.0001353331],"domain_scores_gemma":[0.9991835,0.00002830897,0.00011229,0.000549258,0.00007288536,0.00005381076],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003121883,0.0009945184,0.4745277,0.0002660335,0.0000235608,0.00001292873,0.0006607439,0.00001850391,0.4993891,0.001655983,0.01536761,0.006771192],"study_design_scores_gemma":[0.0004014696,0.00007358276,0.8823432,0.00003718252,0.00004138956,0.000003575203,0.0001066623,0.00005571376,0.1160765,0.0004434645,0.0003670707,0.00005016075],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9748802,0.0003482061,0.0002860676,0.002316254,0.0001297038,0.0002654543,0.000004113765,0.00002170164,0.02174836],"genre_scores_gemma":[0.9853548,0.00002998037,0.00005473309,0.0005330152,0.00005221212,0.000001380546,0.000004776144,0.000005967056,0.01396315],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4078155,"threshold_uncertainty_score":0.220063,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006425154217999275,"score_gpt":0.2345299882758935,"score_spread":0.2281048340578943,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}